RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A8MWL6 223 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 GNRH2O43555 120 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 TMEM18Q96B42 140 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 TMEM208Q9BTX3 173 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 TPPP3Q9BW30 176 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 TP53TG3Q9ULZ0 132 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 IGHV3OR16-12A0A075B7B8 117 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 MUC21A0A0G2JKD1 596 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 MUC21A0A140T8X8 626 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 SPRY2O43597 315 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 PRB2P02812 416 aaPredicted RBP7.45□□□□□ -1.22
SRP54-208ENST00000555557 IGHV4-30-4P0DP06 118 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 COTL1Q14019 142 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 CT83Q5H943 113 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 FAM159AQ6UWV7 190 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 NUP35Q8NFH5 326 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 PGLYRP4Q96LB8 373 aa7.45□□□□□ -1.22
SRP54-208ENST00000555557 MGAM2Q2M2H8 2515 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 FRMD6-AS1P0C7T7 363 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 KCNIP4Q6PIL6 250 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 IMMP2LQ96T52 175 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 INSP01308 110 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 TYMSP04818 313 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 C1orf158Q8N1D5 194 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 LINC01587Q99440 93 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 CSTL1Q9H114 145 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
SRP54-208ENST00000555557 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
SRP54-208ENST00000555557 NOTCH1P46531 2555 aa7.43□□□□□ -1.22
SRP54-208ENST00000555557 IGHV1OR15-1A0A075B7D0 117 aa7.43□□□□□ -1.22
SRP54-208ENST00000555557 LOC102724200A0A096LPH7 203 aaPredicted RBP7.43□□□□□ -1.22
SRP54-208ENST00000555557 MRPL54Q6P161 138 aaKnown RBP7.43□□□□□ -1.22
SRP54-208ENST00000555557 LYZL1Q6UWQ5 148 aa7.43□□□□□ -1.22
SRP54-208ENST00000555557 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
SRP54-208ENST00000555557 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
SRP54-208ENST00000555557 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
SRP54-208ENST00000555557 RPS20P60866 119 aaKnown RBP7.42□□□□□ -1.22
SRP54-208ENST00000555557 MORN3Q6PF18 240 aaPredicted RBP7.42□□□□□ -1.22
SRP54-208ENST00000555557 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 CSNK1G2-AS1Q8NCQ2 148 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 PYGO2Q9BRQ0 406 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 MDFICQ9P1T7 246 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 KIR2DL5BA0A0G2JN68 375 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 KIR2DL5BA0A0G2JPC4 375 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 CBY3A6NI87 242 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 H3BVH4 76 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 ARMS2P0C7Q2 107 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 IGLC6P0CF74 106 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
SRP54-208ENST00000555557 TDRG1Q3Y452 100 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 KIR2DL5AQ8N109 375 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 BTF3L4Q96K17 158 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 KCNS1Q96KK3 526 aa7.42□□□□□ -1.22
SRP54-208ENST00000555557 FAM231BA6NCW3 169 aa7.41□□□□□ -1.22
SRP54-208ENST00000555557 NPSP0C0P6 89 aa7.41□□□□□ -1.22
SRP54-208ENST00000555557 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
SRP54-208ENST00000555557 AZU1P20160 251 aa7.41□□□□□ -1.22
SRP54-208ENST00000555557 ASIPP42127 132 aa7.41□□□□□ -1.22
SRP54-208ENST00000555557 SCGB1D1O95968 90 aa7.4□□□□□ -1.22
SRP54-208ENST00000555557 ZNF705AQ6ZN79 300 aaPredicted RBP7.4□□□□□ -1.22
SRP54-208ENST00000555557 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.22
SRP54-208ENST00000555557 C20orf144Q9BQM9 153 aa7.4□□□□□ -1.22
SRP54-208ENST00000555557 C1QTNF4Q9BXJ3 329 aa7.4□□□□□ -1.22
SRP54-208ENST00000555557 IGHV3-16A0A0C4DH30 117 aa7.4□□□□□ -1.23
SRP54-208ENST00000555557 CAMPP49913 170 aa7.4□□□□□ -1.23
SRP54-208ENST00000555557 MSRB1Q9NZV6 116 aa7.4□□□□□ -1.23
SRP54-208ENST00000555557 A0A1B0GUT8 65 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 NTF3P20783 257 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 APOC4P55056 127 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 DEFB135Q30KP9 77 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 KIR2DL5BQ8NHK3 375 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 MIEN1Q9BRT3 115 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
SRP54-208ENST00000555557 TRAV9-1A0A075B6T8 112 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 M0R381 172 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 SNAI2O43623 268 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 OR5AL1P0C617 328 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 CTRLP40313 264 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 TWIST1Q15672 202 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 KPRPQ5T749 579 aaPredicted RBP7.39□□□□□ -1.23
SRP54-208ENST00000555557 DMRTA1Q5VZB9 504 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 TMEM256Q8N2U0 113 aa7.39□□□□□ -1.23
SRP54-208ENST00000555557 TRGV11A0A075B6L2 103 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 A0A1B0GXF2 115 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 F2Z2F3 143 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 K7EIL1 84 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 SCRT2Q9NQ03 307 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 PHLDA3Q9Y5J5 127 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 NBEAL2Q6ZNJ1 2754 aa7.38□□□□□ -1.23
SRP54-208ENST00000555557 A8MZ25 164 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 SNURFLB1AK76 121 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 HBBP68871 147 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 COL5A1-AS1Q5SY13 56 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 BORCS7Q96B45 105 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 LINC00467Q9BRT7 94 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 RIGQ13278 110 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms