RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 DPM2O94777 84 aa18■□□□□ 0.47
STRN3-207ENST00000555358 FXYD2P54710 66 aa18■□□□□ 0.47
STRN3-207ENST00000555358 EEF1AKMT3Q96AZ1 226 aa18■□□□□ 0.47
STRN3-207ENST00000555358 TRAV26-2A0A0B4J265 109 aa17.99■□□□□ 0.47
STRN3-207ENST00000555358 IGF1P05019 195 aa17.99■□□□□ 0.47
STRN3-207ENST00000555358 GTSCR1Q86UQ5 136 aa17.99■□□□□ 0.47
STRN3-207ENST00000555358 METTL26Q96S19 204 aa17.99■□□□□ 0.47
STRN3-207ENST00000555358 CHAC1Q9BUX1 264 aa17.99■□□□□ 0.47
STRN3-207ENST00000555358 IGHV4-4A0A075B6R2 117 aa17.99■□□□□ 0.47
STRN3-207ENST00000555358 ZC2HC1BQ5TFG8 222 aa17.99■□□□□ 0.47
STRN3-207ENST00000555358 SONP18583 2426 aaKnown RBP17.99■□□□□ 0.47
STRN3-207ENST00000555358 TRBV7-1A0A0A6YYK4 115 aa17.98■□□□□ 0.47
STRN3-207ENST00000555358 GCSHP23434 173 aa17.98■□□□□ 0.47
STRN3-207ENST00000555358 SPCS1Q9Y6A9 102 aa17.98■□□□□ 0.47
STRN3-207ENST00000555358 TRBV25-1A0A075B6N4 114 aa17.97■□□□□ 0.47
STRN3-207ENST00000555358 SMIM13P0DJ93 91 aa17.97■□□□□ 0.47
STRN3-207ENST00000555358 HLA-DRB4P13762 266 aa17.97■□□□□ 0.47
STRN3-207ENST00000555358 LAGE3Q14657 143 aa17.97■□□□□ 0.47
STRN3-207ENST00000555358 SMIM15Q7Z3B0 74 aa17.97■□□□□ 0.47
STRN3-207ENST00000555358 HLA-DRB4X5D2U9 266 aa17.97■□□□□ 0.47
STRN3-207ENST00000555358 C9orf139Q6ZV77 190 aa17.96■□□□□ 0.47
STRN3-207ENST00000555358 UFC1Q9Y3C8 167 aa17.96■□□□□ 0.47
STRN3-207ENST00000555358 ACANP16112 2415 aa17.96■□□□□ 0.47
STRN3-207ENST00000555358 TMEM95Q3KNT9 176 aa17.96■□□□□ 0.47
STRN3-207ENST00000555358 OR5A1Q8NGJ0 315 aa17.96■□□□□ 0.47
STRN3-207ENST00000555358 MRPL35Q9NZE8 188 aaKnown RBP17.96■□□□□ 0.47
STRN3-207ENST00000555358 PRR9Q5T870 116 aa17.95■□□□□ 0.46
STRN3-207ENST00000555358 NEGR1Q7Z3B1 354 aa17.95■□□□□ 0.46
STRN3-207ENST00000555358 TMEM160Q9NX00 188 aa17.95■□□□□ 0.46
STRN3-207ENST00000555358 SAMD5Q5TGI4 173 aa17.94■□□□□ 0.46
STRN3-207ENST00000555358 Q6YL49 198 aa17.94■□□□□ 0.46
STRN3-207ENST00000555358 PHLDA1Q8WV24 401 aaPredicted RBP17.94■□□□□ 0.46
STRN3-207ENST00000555358 SPANXN1Q5VSR9 72 aa17.94■□□□□ 0.46
STRN3-207ENST00000555358 MYOZ3Q8TDC0 251 aa17.94■□□□□ 0.46
STRN3-207ENST00000555358 FABP2P12104 132 aa17.93■□□□□ 0.46
STRN3-207ENST00000555358 ATP5G2Q06055 141 aa17.93■□□□□ 0.46
STRN3-207ENST00000555358 TM2D2Q9BX73 214 aa17.93■□□□□ 0.46
STRN3-207ENST00000555358 CSTL1Q9H114 145 aa17.92■□□□□ 0.46
STRN3-207ENST00000555358 KLK15Q9H2R5 256 aa17.92■□□□□ 0.46
STRN3-207ENST00000555358 A0A087WX48 190 aa17.92■□□□□ 0.46
STRN3-207ENST00000555358 G3V4G9 280 aa17.92■□□□□ 0.46
STRN3-207ENST00000555358 H3BVH4 76 aa17.92■□□□□ 0.46
STRN3-207ENST00000555358 LCNL1Q6ZST4 164 aa17.92■□□□□ 0.46
STRN3-207ENST00000555358 C20orf173Q96LM9 149 aa17.92■□□□□ 0.46
STRN3-207ENST00000555358 K7ERJ3 54 aa17.91■□□□□ 0.46
STRN3-207ENST00000555358 HOXA3O43365 443 aaPredicted RBP17.91■□□□□ 0.46
STRN3-207ENST00000555358 CEND1Q8N111 149 aa17.91■□□□□ 0.46
STRN3-207ENST00000555358 MAPKAPK5-AS1Q8N8E1 139 aa17.91■□□□□ 0.46
STRN3-207ENST00000555358 GLMPQ8WWB7 406 aa17.91■□□□□ 0.46
STRN3-207ENST00000555358 C16orf92Q96LL3 132 aa17.91■□□□□ 0.46
STRN3-207ENST00000555358 VPREB3Q9UKI3 123 aa17.91■□□□□ 0.46
STRN3-207ENST00000555358 FAM223BA6NKX1 122 aa17.9■□□□□ 0.46
STRN3-207ENST00000555358 FAM223AQ8IWN6 122 aa17.9■□□□□ 0.46
STRN3-207ENST00000555358 MRAP2Q96G30 205 aa17.9■□□□□ 0.46
STRN3-207ENST00000555358 LENEPQ9Y5L5 61 aa17.89■□□□□ 0.45
STRN3-207ENST00000555358 PF4V1P10720 104 aa17.88■□□□□ 0.45
STRN3-207ENST00000555358 DUX5Q96PT3 197 aa17.88■□□□□ 0.45
STRN3-207ENST00000555358 SMIM2Q9BVW6 85 aa17.88■□□□□ 0.45
STRN3-207ENST00000555358 CFHR3Q02985 330 aa17.88■□□□□ 0.45
STRN3-207ENST00000555358 ATP6V0BQ99437 205 aa17.88■□□□□ 0.45
STRN3-207ENST00000555358 TRBV12-3P01733 135 aa17.87■□□□□ 0.45
STRN3-207ENST00000555358 GPHB5Q86YW7 130 aa17.87■□□□□ 0.45
STRN3-207ENST00000555358 NHP2Q9NX24 153 aaKnown RBP17.87■□□□□ 0.45
STRN3-207ENST00000555358 MYO9AB2RTY4 2548 aa17.87■□□□□ 0.45
STRN3-207ENST00000555358 IGHV3-11P01762 117 aa17.87■□□□□ 0.45
STRN3-207ENST00000555358 KRTAP1-1Q07627 177 aa17.87■□□□□ 0.45
STRN3-207ENST00000555358 IGLV1-40P01703 118 aa17.86■□□□□ 0.45
STRN3-207ENST00000555358 PLNP26678 52 aa17.86■□□□□ 0.45
STRN3-207ENST00000555358 ZFAND2AQ8N6M9 145 aa17.86■□□□□ 0.45
STRN3-207ENST00000555358 TRAV12-1A0A0B4J245 112 aa17.86■□□□□ 0.45
STRN3-207ENST00000555358 C10orf99Q6UWK7 81 aa17.86■□□□□ 0.45
STRN3-207ENST00000555358 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.85■□□□□ 0.45
STRN3-207ENST00000555358 H3BUA1 57 aa17.85■□□□□ 0.45
STRN3-207ENST00000555358 K7EMI3 77 aa17.84■□□□□ 0.45
STRN3-207ENST00000555358 BRI3O95415 125 aa17.84■□□□□ 0.45
STRN3-207ENST00000555358 RIPPLY3P57055 190 aa17.84■□□□□ 0.45
STRN3-207ENST00000555358 TAL2Q16559 108 aa17.84■□□□□ 0.45
STRN3-207ENST00000555358 UNQ9165/PRO28630Q6UXU0 137 aa17.84■□□□□ 0.45
STRN3-207ENST00000555358 RASL10AQ92737 203 aa17.84■□□□□ 0.45
STRN3-207ENST00000555358 F8VRH5 84 aa17.83■□□□□ 0.45
STRN3-207ENST00000555358 J3KRW8 73 aa17.83■□□□□ 0.45
STRN3-207ENST00000555358 SOCS3O14543 225 aa17.83■□□□□ 0.45
STRN3-207ENST00000555358 SPRY2O43597 315 aa17.83■□□□□ 0.45
STRN3-207ENST00000555358 ARL3P36405 182 aa17.83■□□□□ 0.45
STRN3-207ENST00000555358 LINC00477Q96M19 166 aa17.83■□□□□ 0.45
STRN3-207ENST00000555358 H7C1H1 209 aa17.83■□□□□ 0.44
STRN3-207ENST00000555358 CUBNO60494 3623 aa17.83■□□□□ 0.44
STRN3-207ENST00000555358 NOTCH2Q04721 2471 aa17.83■□□□□ 0.44
STRN3-207ENST00000555358 SUMO2P61956 95 aaKnown RBP17.82■□□□□ 0.44
STRN3-207ENST00000555358 TOMM6Q96B49 74 aa17.82■□□□□ 0.44
STRN3-207ENST00000555358 USMG5Q96IX5 58 aa17.82■□□□□ 0.44
STRN3-207ENST00000555358 ANK3Q12955 4377 aaKnown RBP17.82■□□□□ 0.44
STRN3-207ENST00000555358 E9PLD3 99 aa17.82■□□□□ 0.44
STRN3-207ENST00000555358 M0R381 172 aa17.82■□□□□ 0.44
STRN3-207ENST00000555358 ORMDL2Q53FV1 153 aa17.82■□□□□ 0.44
STRN3-207ENST00000555358 ZNF702PQ9H963 129 aa17.82■□□□□ 0.44
STRN3-207ENST00000555358 ZNF580Q9UK33 172 aa17.82■□□□□ 0.44
STRN3-207ENST00000555358 TRAV21A0A0B4J279 112 aa17.8■□□□□ 0.44
STRN3-207ENST00000555358 DEFB1P60022 68 aa17.8■□□□□ 0.44
STRN3-207ENST00000555358 RPL39LQ96EH5 51 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms