RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 SYS1-DBNDD2H3BUS1 97 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 PRM2P04554 102 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 CRYGCP07315 174 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 ANXA2RQ3ZCQ2 193 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 RAX2Q96IS3 184 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 UNC79Q9P2D8 2635 aa9.42□□□□□ -0.9
ARHGEF40-206ENST00000555232 NBEAL2Q6ZNJ1 2754 aa9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 C2orf70A6NJV1 201 aa9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 CRYGBP07316 175 aa9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 ZNF80P51504 273 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 TSSC4Q9Y5U2 329 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 TMEM170BQ5T4T1 132 aa9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 C18orf65Q6ZTR6 163 aa9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 USMG5Q96IX5 58 aa9.41□□□□□ -0.9
ARHGEF40-206ENST00000555232 FAM223BA6NKX1 122 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 CRYBA4P53673 196 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 FAM223AQ8IWN6 122 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 ATP6V0BQ99437 205 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 IGHV4OR15-8A0A075B7B6 117 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 A0A087WW49 117 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 STHQ8IWL8 128 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 VPREB3Q9UKI3 123 aa9.4□□□□□ -0.9
ARHGEF40-206ENST00000555232 A0A0U1RRA0 63 aa9.4□□□□□ -0.91
ARHGEF40-206ENST00000555232 A6NDN8 102 aa9.4□□□□□ -0.91
ARHGEF40-206ENST00000555232 C9orf139Q6ZV77 190 aa9.4□□□□□ -0.91
ARHGEF40-206ENST00000555232 PHLDA1Q8WV24 401 aaPredicted RBP9.4□□□□□ -0.91
ARHGEF40-206ENST00000555232 IGF2BP2-AS1Q96M15 143 aa9.4□□□□□ -0.91
ARHGEF40-206ENST00000555232 PSMB2P49721 201 aa9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 SRSF8Q9BRL6 282 aaKnown RBP9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 LTAP01374 205 aa9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 HIST1H4GQ99525 98 aa9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 SMIM27A0A1W2PRY6 76 aa9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 FBN2P35556 2912 aa9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 RRN3P1Q2M238 152 aa9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
ARHGEF40-206ENST00000555232 NPYP01303 97 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 STAB1Q9NY15 2570 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 FABP2P12104 132 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 SCGB3A1Q96QR1 104 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 LY96Q9Y6Y9 160 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 MUC4Q99102 2169 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 TRGV2A0A075B6R0 118 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■■■■□ 20.3
ARHGEF40-206ENST00000555232 HSD52Q0P140 79 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 PDE6HQ13956 83 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 ZNF876PQ49A33 203 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 GDF5OSQ5U4N7 250 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 JPT2Q9H910 190 aa9.38□□□□□ -0.91
ARHGEF40-206ENST00000555232 MRPL51Q4U2R6 128 aaKnown RBP9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 HRNRQ86YZ3 2850 aaPredicted RBP9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 LYPD1Q8N2G4 141 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 TMEM158Q8WZ71 300 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 KIR2DL4Q99706 377 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 GTSCR1Q86UQ5 136 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 IGHV7-4-1A0A0J9YVY3 117 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 K7EP34 96 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 TMEM14CQ9P0S9 112 aa9.37□□□□□ -0.91
ARHGEF40-206ENST00000555232 NDUFA4O00483 81 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 MS4A6AQ9H2W1 248 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 SMPXQ9UHP9 88 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 TRGV1A0A0A0MS02 117 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 K7EMI3 77 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 OVOL1O14753 267 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 GATA3P23771 443 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 IFI27L1Q96BM0 104 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 SCRT2Q9NQ03 307 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 PEMTQ9UBM1 199 aa9.36□□□□□ -0.91
ARHGEF40-206ENST00000555232 WI2-2373I1.2A0A1W2PRP0 233 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 GAGE12HA6NDE8 117 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 TNFRSF6BO95407 300 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 IGHG2P01859 326 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 DEFB130BP0DP73 79 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 DEFB130AP0DP74 79 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 CD300EQ496F6 205 aaPredicted RBP9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 SYT8Q8NBV8 401 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 J3QR89 54 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 CRXO43186 299 aaPredicted RBP9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 SEC11AP67812 179 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 GEMIN7Q9H840 131 aaKnown RBP9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 SMAD5-AS1Q9Y6J3 95 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 COL6A5A8TX70 2615 aa9.35□□□□□ -0.91
ARHGEF40-206ENST00000555232 OR11H12B2RN74 326 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 HBDP02042 147 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 IGHV4-31P0DP07 118 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 HERVK_113P61574 105 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 ADAMTSL5Q6ZMM2 481 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 CRIP1P50238 77 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms