RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 A0A087WX48 190 aa9.42□□□□□ -0.9
PPP4R3A-206ENST00000554943 SMIM2Q9BVW6 85 aa9.42□□□□□ -0.9
PPP4R3A-206ENST00000554943 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
PPP4R3A-206ENST00000554943 HSD52Q0P140 79 aa9.42□□□□□ -0.9
PPP4R3A-206ENST00000554943 SAMD13Q5VXD3 122 aa9.42□□□□□ -0.9
PPP4R3A-206ENST00000554943 PCP2Q8IVA1 136 aa9.42□□□□□ -0.9
PPP4R3A-206ENST00000554943 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
PPP4R3A-206ENST00000554943 B4DSR2 109 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 J3QLI3 93 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 IGSF10Q6WRI0 2623 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 TRAV8-6A0A0B4J262 113 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 SMIM17P0DL12 118 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 NMUP48645 174 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
PPP4R3A-206ENST00000554943 TRAV26-2A0A0B4J265 109 aa9.4□□□□□ -0.9
PPP4R3A-206ENST00000554943 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
PPP4R3A-206ENST00000554943 JMJD8Q96S16 334 aa9.4□□□□□ -0.9
PPP4R3A-206ENST00000554943 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
PPP4R3A-206ENST00000554943 ANXA2RQ3ZCQ2 193 aa9.4□□□□□ -0.9
PPP4R3A-206ENST00000554943 UTP20O75691 2785 aaKnown RBP9.4□□□□□ -0.91
PPP4R3A-206ENST00000554943 A0A1B0GWB2 263 aa9.4□□□□□ -0.91
PPP4R3A-206ENST00000554943 POLR2KP53803 58 aaKnown RBP9.4□□□□□ -0.91
PPP4R3A-206ENST00000554943 CLEC2AQ6UVW9 174 aa9.4□□□□□ -0.91
PPP4R3A-206ENST00000554943 RHPN1-AS1Q9BWJ2 59 aa9.4□□□□□ -0.91
PPP4R3A-206ENST00000554943 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.91
PPP4R3A-206ENST00000554943 TRBV6-5A0A0K0K1A5 114 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 C9orf118A6NHY6 69 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 DPH3P1Q9H4G8 78 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 USP9XQ93008 2570 aaPredicted RBP9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 H3BVH4 76 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 TSHBP01222 138 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 IGKCP01834 107 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 CRYGDP07320 174 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 WFDC12Q8WWY7 111 aa9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 PRRC2AP48634 2157 aaKnown RBP9.39□□□□□ -0.91
PPP4R3A-206ENST00000554943 COX6B1P14854 86 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 AMTNQ6UX39 209 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 NOTCH2Q04721 2471 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 DEFB1P60022 68 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 OR10J6PQ8NGY7 276 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 K7EQG2 157 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 Q6YL49 198 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 ZNF702PQ9H963 129 aa9.38□□□□□ -0.91
PPP4R3A-206ENST00000554943 CCDC168Q8NDH2 2452 aa9.37□□□□□ -0.91
PPP4R3A-206ENST00000554943 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
PPP4R3A-206ENST00000554943 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
PPP4R3A-206ENST00000554943 DPM2O94777 84 aa9.37□□□□□ -0.91
PPP4R3A-206ENST00000554943 LINC01356Q8N9X3 169 aa9.37□□□□□ -0.91
PPP4R3A-206ENST00000554943 A1L4Q6 167 aa9.37□□□□□ -0.91
PPP4R3A-206ENST00000554943 TAL2Q16559 108 aa9.37□□□□□ -0.91
PPP4R3A-206ENST00000554943 ANK3Q12955 4377 aaKnown RBP9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 F6UB75 175 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 ASIPP42127 132 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 CDKN1BP46527 198 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 ATP5J2P56134 94 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 IGHV3-16A0A0C4DH30 117 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 A0A0J9YX75 114 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 GNRH2O43555 120 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 PLNP26678 52 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 DEFB112Q30KQ8 113 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 ORMDL2Q53FV1 153 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 PTH2Q96A98 100 aa9.36□□□□□ -0.91
PPP4R3A-206ENST00000554943 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 TRBV7-3A0A075B6L6 115 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 TRBV25-1A0A075B6N4 114 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 LY6EQ16553 131 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 RPL39LQ96EH5 51 aaKnown RBP9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 BAALCQ8WXS3 180 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 FAM104AQ969W3 186 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 UFC1Q9Y3C8 167 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 FLNCQ14315 2725 aa9.35□□□□□ -0.91
PPP4R3A-206ENST00000554943 DOPEY1Q5JWR5 2465 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 F8VRH5 84 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 IGHV4-59P01825 116 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 TRAV2A0A0B4J234 112 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 PPP1R17O96001 155 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 C10orf99Q6UWK7 81 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 LINC00467Q9BRT7 94 aa9.34□□□□□ -0.91
PPP4R3A-206ENST00000554943 MXRA5Q9NR99 2828 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 SAP30O75446 220 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 IGHV3-11P01762 117 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 AP1S3Q96PC3 154 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 H7C1H1 209 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 LGALS1P09382 135 aaKnown RBP9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 NEGR1Q7Z3B1 354 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 FOXC2Q99958 501 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 ABCA12Q86UK0 2595 aa9.33□□□□□ -0.92
PPP4R3A-206ENST00000554943 LINC01549A6NIU2 74 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms