RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 A0A1W2PPQ1 181 aa11.72□□□□□ -0.53
SPTLC2-203ENST00000554901 OR5AL1P0C617 328 aa11.72□□□□□ -0.53
SPTLC2-203ENST00000554901 ARMS2P0C7Q2 107 aa11.72□□□□□ -0.53
SPTLC2-203ENST00000554901 OR10G8Q8NGN5 311 aa11.72□□□□□ -0.53
SPTLC2-203ENST00000554901 RASL10AQ92737 203 aa11.72□□□□□ -0.53
SPTLC2-203ENST00000554901 FAM231BA6NCW3 169 aa11.71□□□□□ -0.53
SPTLC2-203ENST00000554901 H3BVH4 76 aa11.71□□□□□ -0.53
SPTLC2-203ENST00000554901 SNAI2O43623 268 aa11.71□□□□□ -0.53
SPTLC2-203ENST00000554901 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 F2Z2F3 143 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 PPP1R2P9O14990 202 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 IGLC6P0CF74 106 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 DAD1P61803 113 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 Q6ZTI0 123 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 WWC2-AS2Q96NR7 200 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 GFRA4Q9GZZ7 299 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 PHLDA3Q9Y5J5 127 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 ZNF876PQ49A33 203 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 SLC7A5P1Q8MH63 180 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 SYT8Q8NBV8 401 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 TSKUQ8WUA8 353 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 V9GYV3 84 aa11.7□□□□□ -0.54
SPTLC2-203ENST00000554901 MT-ND4LP03901 98 aa11.69□□□□□ -0.54
SPTLC2-203ENST00000554901 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
SPTLC2-203ENST00000554901 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
SPTLC2-203ENST00000554901 FOXA3P55318 350 aaPredicted RBP11.69□□□□□ -0.54
SPTLC2-203ENST00000554901 ZFP82Q8N141 532 aa11.69□□□□□ -0.54
SPTLC2-203ENST00000554901 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 GAGE7O76087 117 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 GZMBP10144 247 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 WDR73Q6P4I2 378 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 ANAPC16Q96DE5 110 aa11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
SPTLC2-203ENST00000554901 TRGV2A0A075B6R0 118 aa11.67□□□□□ -0.54
SPTLC2-203ENST00000554901 NXPH4O95158 308 aa11.67□□□□□ -0.54
SPTLC2-203ENST00000554901 CTRLP40313 264 aa11.67□□□□□ -0.54
SPTLC2-203ENST00000554901 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
SPTLC2-203ENST00000554901 CIDEAO60543 219 aa11.66□□□□□ -0.54
SPTLC2-203ENST00000554901 ATP5G1P05496 136 aa11.66□□□□□ -0.54
SPTLC2-203ENST00000554901 CACNG7P62955 275 aa11.66□□□□□ -0.54
SPTLC2-203ENST00000554901 RNF212Q495C1 297 aa11.66□□□□□ -0.54
SPTLC2-203ENST00000554901 CNFNQ9BYD5 112 aa11.66□□□□□ -0.54
SPTLC2-203ENST00000554901 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.54
SPTLC2-203ENST00000554901 A8MWV9 139 aa11.65□□□□□ -0.54
SPTLC2-203ENST00000554901 SPANXN1Q5VSR9 72 aa11.65□□□□□ -0.54
SPTLC2-203ENST00000554901 Q6ZTC4 211 aa11.65□□□□□ -0.54
SPTLC2-203ENST00000554901 OR10AG1Q8NH19 301 aa11.65□□□□□ -0.54
SPTLC2-203ENST00000554901 GTSF1Q8WW33 167 aa11.65□□□□□ -0.54
SPTLC2-203ENST00000554901 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.54
SPTLC2-203ENST00000554901 TRAV10A0A0B4J240 114 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 TRAV4A0A0B4J268 109 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 LYZL1Q6UWQ5 148 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 SVBPQ8N300 66 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 TPPP3Q9BW30 176 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 MUC4Q99102 2169 aa11.65□□□□□ -0.55
SPTLC2-203ENST00000554901 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
SPTLC2-203ENST00000554901 M0R381 172 aa11.64□□□□□ -0.55
SPTLC2-203ENST00000554901 RHEBQ15382 184 aa11.64□□□□□ -0.55
SPTLC2-203ENST00000554901 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
SPTLC2-203ENST00000554901 RS1O15537 224 aa11.63□□□□□ -0.55
SPTLC2-203ENST00000554901 APOC3P02656 99 aa11.63□□□□□ -0.55
SPTLC2-203ENST00000554901 MUC7Q8TAX7 377 aa11.63□□□□□ -0.55
SPTLC2-203ENST00000554901 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
SPTLC2-203ENST00000554901 TMEM242Q9NWH2 141 aa11.63□□□□□ -0.55
SPTLC2-203ENST00000554901 A0A087WWC5 75 aa11.62□□□□□ -0.55
SPTLC2-203ENST00000554901 SNAPINO95295 136 aa11.62□□□□□ -0.55
SPTLC2-203ENST00000554901 ZFP2Q6ZN57 461 aa11.62□□□□□ -0.55
SPTLC2-203ENST00000554901 CLRN3Q8NCR9 226 aa11.62□□□□□ -0.55
SPTLC2-203ENST00000554901 OR4C5Q8NGB2 326 aa11.62□□□□□ -0.55
SPTLC2-203ENST00000554901 PHLDA1Q8WV24 401 aaPredicted RBP11.62□□□□□ -0.55
SPTLC2-203ENST00000554901 DEFB131BA0A096LNP1 70 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 RHODO00212 210 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 SLAQ13239 276 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 CFAP126Q5VTH2 177 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 POM121L12Q8N7R1 296 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 FAM210BQ96KR6 192 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 PGLYRP4Q96LB8 373 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
SPTLC2-203ENST00000554901 A0A1B0GUT8 65 aa11.6□□□□□ -0.55
SPTLC2-203ENST00000554901 C7orf77A4D0Y5 90 aa11.6□□□□□ -0.55
SPTLC2-203ENST00000554901 NUPR2A6NF83 97 aa11.6□□□□□ -0.55
SPTLC2-203ENST00000554901 NTF3P20783 257 aa11.6□□□□□ -0.55
SPTLC2-203ENST00000554901 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
SPTLC2-203ENST00000554901 AP1S3Q96PC3 154 aa11.6□□□□□ -0.55
SPTLC2-203ENST00000554901 TRGC1P0CF51 173 aa11.6□□□□□ -0.55
SPTLC2-203ENST00000554901 MUC21A0A0G2JKD1 596 aa11.59□□□□□ -0.55
SPTLC2-203ENST00000554901 MUC21A0A140T8X8 626 aa11.59□□□□□ -0.55
SPTLC2-203ENST00000554901 C3orf84H3BNL1 204 aa11.59□□□□□ -0.55
SPTLC2-203ENST00000554901 CEMP1Q6PRD7 247 aaPredicted RBP11.59□□□□□ -0.55
SPTLC2-203ENST00000554901 ZNF479Q96JC4 524 aa11.59□□□□□ -0.55
SPTLC2-203ENST00000554901 A0A1B0GW15 77 aa11.58□□□□□ -0.56
SPTLC2-203ENST00000554901 F5H768 121 aa11.58□□□□□ -0.56
SPTLC2-203ENST00000554901 HTN3P15516 51 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms