RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ALX1Q15699 326 aa0.5□□□□□ -2.33
SCFD1-213ENST00000554776 ATP6V0E2Q8NHE4 81 aa0.5□□□□□ -2.33
SCFD1-213ENST00000554776 ESPL1Q14674 2120 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 CCDC171Q6TFL3 1326 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 CXorf51AA0A1B0GTR3 108 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 IGLC6P0CF74 106 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 SPINK7P58062 85 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 TSTD1Q8NFU3 115 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 DYNLRB2Q8TF09 96 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 PPDPFLQ8WWR9 84 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 MAFIPQ8WZ33 124 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 ABCA1O95477 2261 aa0.49□□□□□ -2.33
SCFD1-213ENST00000554776 APCP25054 2843 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 PLXNA2O75051 1894 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 J3QLW9 94 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 M0R2Z0 102 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 LINC00694P0DN24 101 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 RPL37P61927 97 aaKnown RBP0.48□□□□□ -2.33
SCFD1-213ENST00000554776 SPINK13Q1W4C9 94 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 NAV3Q8IVL0 2385 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 ABCA4P78363 2273 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 SPAG17Q6Q759 2223 aa0.48□□□□□ -2.33
SCFD1-213ENST00000554776 BLMP54132 1417 aaPredicted RBP0.47□□□□□ -2.33
SCFD1-213ENST00000554776 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 CEP152O94986 1710 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 MYH13Q9UKX3 1938 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 TCRBV3S1A0A5B6 114 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 M0R2P5 195 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 KLKP1Q107X0 134 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 MIC13Q5XKP0 118 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 ATP11AUNQ6ZP68 121 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 MMGT1Q8N4V1 131 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 IFI27L1Q96BM0 104 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 TMEM141Q96I45 108 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 TMEM14BQ9NUH8 114 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 MEGF8Q7Z7M0 2845 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 KIF13AQ9H1H9 1805 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 PTPRMP28827 1452 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 OVOS2A0A0J9YW53 1432 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 OVOS2Q6IE36 1432 aa0.47□□□□□ -2.33
SCFD1-213ENST00000554776 TRBV20-1A0A075B6N2 111 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 K7ERU9 68 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 APOC1P02654 83 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 MPC1LP0DKB6 136 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 SMIM21Q3B7S5 101 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 CTAGE3PQ8IX95 158 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 ANP32BQ92688 251 aaKnown RBP0.46□□□□□ -2.34
SCFD1-213ENST00000554776 RBBP6Q7Z6E9 1792 aaKnown RBP0.46□□□□□ -2.34
SCFD1-213ENST00000554776 UHRF1BP1LA0JNW5 1464 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 FHAD1B1AJZ9 1412 aa0.46□□□□□ -2.34
SCFD1-213ENST00000554776 ZNF670-ZNF695F2Z2N8 137 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 J3QR89 54 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 YPEL1O60688 119 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 PRH1P02810 166 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 NPC2P61916 151 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 OR2T2Q6IF00 324 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 TSKUQ8WUA8 353 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 VPS25Q9BRG1 176 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 COPZ2Q9P299 210 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 DISP2A7MBM2 1401 aa0.45□□□□□ -2.34
SCFD1-213ENST00000554776 VIRMAQ69YN4 1812 aaKnown RBP0.45□□□□□ -2.34
SCFD1-213ENST00000554776 TRAV2A0A0B4J234 112 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 TEX49A0A1B0GTD5 131 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 PYYP10082 97 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 ELOF1P60002 83 aaKnown RBP0.44□□□□□ -2.34
SCFD1-213ENST00000554776 LINC01545Q5VT33 79 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 CYP2G1PQ6ZSU1 146 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 DSCR8Q96T75 97 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 TPT1P8Q9HAU6 139 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 PRG4Q92954 1404 aaPredicted RBP0.44□□□□□ -2.34
SCFD1-213ENST00000554776 MYH6P13533 1939 aa0.44□□□□□ -2.34
SCFD1-213ENST00000554776 TSPAN19P0C672 248 aa0.43□□□□□ -2.34
SCFD1-213ENST00000554776 COX4I1P13073 169 aa0.43□□□□□ -2.34
SCFD1-213ENST00000554776 SMCO1Q147U7 214 aa0.43□□□□□ -2.34
SCFD1-213ENST00000554776 COA4Q9NYJ1 87 aa0.43□□□□□ -2.34
SCFD1-213ENST00000554776 NDUFA12Q9UI09 145 aa0.43□□□□□ -2.34
SCFD1-213ENST00000554776 MED13LQ71F56 2210 aa0.43□□□□□ -2.34
SCFD1-213ENST00000554776 TANC1Q9C0D5 1861 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 TRAV12-3A0A0B4J271 114 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 NPFFO15130 113 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 PITX3O75364 302 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 KRTAP2-3P0C7H8 128 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 PIRTP0C851 137 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 EMX2Q04743 252 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 Q6ZUT4 128 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 VSTM2AQ8TAG5 236 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 SMR3AQ99954 134 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 KRTAP2-4Q9BYR9 128 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 KRTAP2-1Q9BYU5 128 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 BET1LQ9NYM9 111 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 PLAC8Q9NZF1 115 aa0.42□□□□□ -2.34
SCFD1-213ENST00000554776 ZNF142P52746 1687 aaPredicted RBP0.41□□□□□ -2.34
SCFD1-213ENST00000554776 A0A096LNT2 108 aa0.41□□□□□ -2.34
SCFD1-213ENST00000554776 C20orf197Q8N268 126 aa0.41□□□□□ -2.34
SCFD1-213ENST00000554776 SAR1AQ9NR31 198 aa0.41□□□□□ -2.34
SCFD1-213ENST00000554776 ERG28Q9UKR5 140 aa0.41□□□□□ -2.34
SCFD1-213ENST00000554776 MUC22E2RYF6 1773 aaPredicted RBP0.41□□□□□ -2.34
SCFD1-213ENST00000554776 USP24Q9UPU5 2620 aa0.41□□□□□ -2.34
SCFD1-213ENST00000554776 MAP2P11137 1827 aaKnown RBP0.41□□□□□ -2.34
SCFD1-213ENST00000554776 F5P12259 2224 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms