RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 C11orf52Q96A22 123 aa6.04□□□□□ -1.44
ACTN1-213ENST00000554508 DERL1Q9BUN8 251 aa6.04□□□□□ -1.44
ACTN1-213ENST00000554508 MDFICQ9P1T7 246 aa6.04□□□□□ -1.44
ACTN1-213ENST00000554508 HHLA3Q9XRX5 114 aa6.04□□□□□ -1.44
ACTN1-213ENST00000554508 ZFP30Q9Y2G7 519 aa6.04□□□□□ -1.44
ACTN1-213ENST00000554508 MRPS16Q9Y3D3 137 aaKnown RBP6.04□□□□□ -1.44
ACTN1-213ENST00000554508 ICOSQ9Y6W8 199 aa6.04□□□□□ -1.44
ACTN1-213ENST00000554508 A0A1W2PPQ1 181 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 RAB19A4D1S5 217 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 BTF3P20290 206 aaKnown RBP6.03□□□□□ -1.44
ACTN1-213ENST00000554508 GNG4P50150 75 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 ZNF80P51504 273 aaPredicted RBP6.03□□□□□ -1.44
ACTN1-213ENST00000554508 CRYBA4P53673 196 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 FHL2Q14192 279 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 MRPL23Q16540 153 aaKnown RBP6.03□□□□□ -1.44
ACTN1-213ENST00000554508 ZNF674Q2M3X9 581 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 BAGE2Q86Y30 109 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 SDF2L1Q9HCN8 221 aa6.03□□□□□ -1.44
ACTN1-213ENST00000554508 TRGV4A0A0C4DH28 118 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 IGHV3-16A0A0C4DH30 117 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 FABP5P3A8MUU1 101 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 M0R2P5 195 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 GNRH2O43555 120 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 IGHV3-53P01767 116 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 PFN1P07737 140 aaKnown RBP6.02□□□□□ -1.45
ACTN1-213ENST00000554508 CENPWQ5EE01 88 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 PRR27Q6MZM9 219 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 ZC2HC1AQ96GY0 325 aa6.02□□□□□ -1.45
ACTN1-213ENST00000554508 TRAV4A0A0B4J268 109 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 TMEM250H0YL14 139 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 SH2D1AO60880 128 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 TYMSP04818 313 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 MGST1P10620 155 aaKnown RBP6.01□□□□□ -1.45
ACTN1-213ENST00000554508 PEA15Q15121 130 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 CLLU1Q5K131 121 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 FAM162BQ5T6X4 162 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 OR4C5Q8NGB2 326 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 ZNF479Q96JC4 524 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 PARLQ9H300 379 aa6.01□□□□□ -1.45
ACTN1-213ENST00000554508 PGPEP1LA6NFU8 196 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 M0R036 132 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 SIVA1O15304 175 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 CIDEAO60543 219 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 ORM1P02763 201 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 SRP19P09132 144 aaKnown RBP6□□□□□ -1.45
ACTN1-213ENST00000554508 SFTA3P0C7M3 94 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 CRIP1P50238 77 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 SRSF3P84103 164 aaKnown RBP6□□□□□ -1.45
ACTN1-213ENST00000554508 TNP2Q05952 138 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 LYPD5Q6UWN5 251 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 NEGR1Q7Z3B1 354 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 COX8CQ7Z4L0 72 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 MLST8Q9BVC4 326 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 C11orf21Q9P2W6 132 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 HERC2O95714 4834 aa6□□□□□ -1.45
ACTN1-213ENST00000554508 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 TMSB15BA0A087X1C1 80 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 ZNF727A8MUV8 499 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 B4DEV8 164 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 C9JCJ5 164 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 IGLV2-8P01709 118 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 GYPEP15421 78 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 SRIP30626 198 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 SH2D6Q7Z4S9 175 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 COMMD7Q86VX2 200 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 PTH2Q96A98 100 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 DAZAP1Q96EP5 407 aaKnown RBP5.99□□□□□ -1.45
ACTN1-213ENST00000554508 SMIM12Q96EX1 92 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 SMIM7Q9BQ49 75 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 SMDT1Q9H4I9 107 aa5.99□□□□□ -1.45
ACTN1-213ENST00000554508 LRP1BQ9NZR2 4599 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 TRAV9-2A0A087WT02 112 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 IGKV3D-20A0A0C4DH25 116 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 KRBOX1C9JBD0 128 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 C9JQL5 133 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 K7EP13 123 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 K7EQD1 137 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 NDUFS6O75380 124 aaKnown RBP5.98□□□□□ -1.45
ACTN1-213ENST00000554508 NXPH4O95158 308 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 ZNF876PQ49A33 203 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 OCC1Q8TAD7 63 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 C9orf85Q96MD7 179 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 KRTAP1-5Q9BYS1 174 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 BIN3Q9NQY0 253 aa5.98□□□□□ -1.45
ACTN1-213ENST00000554508 GRIFINA4D1Z8 144 aa5.97□□□□□ -1.45
ACTN1-213ENST00000554508 RS1O15537 224 aa5.97□□□□□ -1.45
ACTN1-213ENST00000554508 GATA1P15976 413 aaPredicted RBP5.97□□□□□ -1.45
ACTN1-213ENST00000554508 S100A4P26447 101 aaKnown RBP5.97□□□□□ -1.45
ACTN1-213ENST00000554508 ASIPP42127 132 aa5.97□□□□□ -1.45
ACTN1-213ENST00000554508 RPL19P84098 196 aaKnown RBP5.97□□□□□ -1.45
ACTN1-213ENST00000554508 LINC01559Q495D7 138 aa5.97□□□□□ -1.45
ACTN1-213ENST00000554508 FAM74A3Q4VXF1 159 aa5.97□□□□□ -1.45
ACTN1-213ENST00000554508 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
ACTN1-213ENST00000554508 TRBV6-4A0A1B0GX49 114 aa5.96□□□□□ -1.46
ACTN1-213ENST00000554508 LINC00862A6NCI5 91 aa5.96□□□□□ -1.46
ACTN1-213ENST00000554508 K7EN84 100 aa5.96□□□□□ -1.46
ACTN1-213ENST00000554508 P01737 135 aa5.96□□□□□ -1.46
ACTN1-213ENST00000554508 TIRAPP58753 221 aa5.96□□□□□ -1.46
ACTN1-213ENST00000554508 LINC00315P59091 139 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms