RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 C2orf83Q53S99 150 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 FAM201AQ5SY85 155 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 MRPL2Q5T653 305 aaKnown RBP3.26□□□□□ -1.89
ATXN3-225ENST00000554214 FAM219BQ5XKK7 198 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 AAED1Q7RTV5 226 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 EXOC3-AS1Q8N2X6 119 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 C15orf53Q8NAA6 179 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 S1PR3Q99500 378 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 CCL19Q99731 98 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 MGST2Q99735 147 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 TMEM59Q9BXS4 323 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 ZNF331Q9NQX6 463 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-225ENST00000554214 KLHDC2Q9Y2U9 406 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 V9GY05 133 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 IGLV3-16A0A075B6K0 115 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV12-2A0A075B6T6 113 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 FAM240AA0A1B0GVK7 77 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 LOC107986453A0A1B0GWG9 222 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 LYRM9A8MSI8 78 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 LYZL6O75951 148 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 HLA-DQA1P01909 254 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 APCSP02743 223 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 RBP4P02753 201 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 COX7CP15954 63 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 HLA-DMBP28068 263 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 S100A3P33764 101 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 ZNF136P52737 540 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 RPL23P62829 140 aaKnown RBP3.25□□□□□ -1.89
ATXN3-225ENST00000554214 ARFRP1Q13795 201 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 CDK5R1Q15078 307 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 C9orf129Q5T035 196 aaKnown RBP3.25□□□□□ -1.89
ATXN3-225ENST00000554214 OR2A1Q8NGT9 310 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 ZNF563Q8TA94 476 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 MYOZ3Q8TDC0 251 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 DLX4Q92988 240 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-225ENST00000554214 RNASE6Q93091 150 aaKnown RBP3.25□□□□□ -1.89
ATXN3-225ENST00000554214 EMC6Q9BV81 110 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 TTTY12Q9BZ98 90 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 AGPAT4-IT1Q9H0P7 198 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 IKZF5Q9H5V7 419 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 HIGD1BQ9P298 99 aa3.25□□□□□ -1.89
ATXN3-225ENST00000554214 PIGBOS1A0A0B4J2F0 54 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 A0A0J9YW62 118 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 MDFIC2A0A1B0GVS7 189 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 GRIFINA4D1Z8 144 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 A8MWL6 223 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 A8MWV9 139 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 LY6LH3BQJ8 138 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 ATOX1O00244 68 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 SDCBPO00560 298 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-225ENST00000554214 LYPD3O95274 346 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 FGF6P10767 208 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 PTGDSP41222 190 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 MFAP2P55001 183 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 HBG1P69891 147 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 HBG2P69892 147 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 MRPS36P82909 103 aaKnown RBP3.24□□□□□ -1.89
ATXN3-225ENST00000554214 KLF5Q13887 457 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-225ENST00000554214 RTL8BQ17RB0 113 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 C12orf74Q32Q52 190 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 LINC01545Q5VT33 79 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 CFAP126Q5VTH2 177 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 NOXRED1Q6NXP6 359 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 TRAPPC6BQ86SZ2 158 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 AMN1Q8IY45 258 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 DRAM1Q8N682 238 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 ZNF645Q8N7E2 425 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
ATXN3-225ENST00000554214 BORCS8Q96FH0 119 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 ABHD14BQ96IU4 210 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 TXNDC17Q9BRA2 123 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 RTL8AQ9BWD3 113 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 Q9HAA7 133 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 GNG13Q9P2W3 67 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 TAC3Q9UHF0 121 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 SERP1Q9Y6X1 66 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 ARID1AO14497 2285 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 RAI1Q7Z5J4 1906 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-225ENST00000554214 DSCAMO60469 2012 aa3.24□□□□□ -1.89
ATXN3-225ENST00000554214 FREM3P0C091 2139 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 VWFP04275 2813 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 TRBV19A0A075B6N1 114 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 TRGV5A0A0B4J1U4 118 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 IGHV1-24A0A0C4DH33 117 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 C5orf63A6NC05 138 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 ZFP92A6NM28 416 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 KNCNA6PVL3 124 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 DEFB108AA8MXU0 73 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 OOSP1A8MZH6 123 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 CST7O76096 145 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 GYPBP06028 91 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 ACYP1P07311 99 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 P0C879 139 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 CCL3P10147 92 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 CSN1S1P47710 185 aa3.23□□□□□ -1.89
ATXN3-225ENST00000554214 RPL18AQ02543 176 aaKnown RBP3.23□□□□□ -1.89
ATXN3-225ENST00000554214 ZNF117Q03924 483 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms