RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 SSBP4Q9BWG4 385 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-210ENST00000554131 RPP21Q9H633 154 aaKnown RBP13.04□□□□□ -0.32
PSEN1-210ENST00000554131 SNAI2O43623 268 aa13.03□□□□□ -0.32
PSEN1-210ENST00000554131 IGLC6P0CF74 106 aa13.03□□□□□ -0.32
PSEN1-210ENST00000554131 MED14OSP0DP75 135 aa13.03□□□□□ -0.32
PSEN1-210ENST00000554131 GZMBP10144 247 aa13.03□□□□□ -0.32
PSEN1-210ENST00000554131 OSTCQ9NRP0 149 aa13.03□□□□□ -0.32
PSEN1-210ENST00000554131 S100A4P26447 101 aaKnown RBP13.02□□□□□ -0.33
PSEN1-210ENST00000554131 ADIRFQ15847 76 aa13.02□□□□□ -0.33
PSEN1-210ENST00000554131 POM121L12Q8N7R1 296 aa13.02□□□□□ -0.33
PSEN1-210ENST00000554131 PLECQ15149 4684 aaKnown RBP13.01□□□□□ -0.33
PSEN1-210ENST00000554131 OR5AL1P0C617 328 aa13.01□□□□□ -0.33
PSEN1-210ENST00000554131 ERVFC1-1P60608 527 aa13.01□□□□□ -0.33
PSEN1-210ENST00000554131 RPS20P60866 119 aaKnown RBP13.01□□□□□ -0.33
PSEN1-210ENST00000554131 PHLDA1Q8WV24 401 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-210ENST00000554131 V9GYV3 84 aa13.01□□□□□ -0.33
PSEN1-210ENST00000554131 GATCO43716 136 aaKnown RBP13□□□□□ -0.33
PSEN1-210ENST00000554131 NXPH4O95158 308 aa13□□□□□ -0.33
PSEN1-210ENST00000554131 CT83Q5H943 113 aa13□□□□□ -0.33
PSEN1-210ENST00000554131 C10orf91Q5T1B1 145 aa13□□□□□ -0.33
PSEN1-210ENST00000554131 SFRP2Q96HF1 295 aa13□□□□□ -0.33
PSEN1-210ENST00000554131 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 PIK3CD-AS1Q5SR53 167 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 OR10AG1Q8NH19 301 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 GTSF1Q8WW33 167 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 NDUFAF3Q9BU61 184 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 SEC11CQ9BY50 192 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 NACAE9PAV3 2078 aa12.99□□□□□ -0.33
PSEN1-210ENST00000554131 TRAV10A0A0B4J240 114 aa12.98□□□□□ -0.33
PSEN1-210ENST00000554131 HOXA5P20719 270 aa12.98□□□□□ -0.33
PSEN1-210ENST00000554131 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 DEFB131BA0A096LNP1 70 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 XKRY2A2RUG3 117 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 F8W036 122 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 ATP5G1P05496 136 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 CTRLP40313 264 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 PNRC1Q12796 327 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-210ENST00000554131 ZFAND6Q6FIF0 208 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-210ENST00000554131 FER1L6-AS1Q8NA97 138 aa12.97□□□□□ -0.33
PSEN1-210ENST00000554131 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 C3orf84H3BNL1 204 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 RS1O15537 224 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 FOXA3P55318 350 aaPredicted RBP12.96□□□□□ -0.33
PSEN1-210ENST00000554131 CFAP126Q5VTH2 177 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 C15orf54Q8N8G6 183 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 ZNF479Q96JC4 524 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 JPT2Q9H910 190 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
PSEN1-210ENST00000554131 PHLDA3Q9Y5J5 127 aa12.96□□□□□ -0.33
PSEN1-210ENST00000554131 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 A8MWL6 223 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 CASC10Q5T4H9 136 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 UFSP1Q6NVU6 142 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 LYZL1Q6UWQ5 148 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 ZFP82Q8N141 532 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 TSKUQ8WUA8 353 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 CNFNQ9BYD5 112 aa12.95□□□□□ -0.34
PSEN1-210ENST00000554131 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 A0A1W2PPQ1 181 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 NUPR2A6NF83 97 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 M0R381 172 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 HTN3P15516 51 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 FHL2Q14192 279 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 GFRA4Q9GZZ7 299 aa12.94□□□□□ -0.34
PSEN1-210ENST00000554131 F2Z2F3 143 aa12.93□□□□□ -0.34
PSEN1-210ENST00000554131 SLC7A5P1Q8MH63 180 aa12.93□□□□□ -0.34
PSEN1-210ENST00000554131 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
PSEN1-210ENST00000554131 SAMD10Q9BYL1 202 aa12.93□□□□□ -0.34
PSEN1-210ENST00000554131 FAM231BA6NCW3 169 aa12.92□□□□□ -0.34
PSEN1-210ENST00000554131 F5H768 121 aa12.92□□□□□ -0.34
PSEN1-210ENST00000554131 RNF212Q495C1 297 aa12.92□□□□□ -0.34
PSEN1-210ENST00000554131 WDR73Q6P4I2 378 aa12.92□□□□□ -0.34
PSEN1-210ENST00000554131 OR4C5Q8NGB2 326 aa12.92□□□□□ -0.34
PSEN1-210ENST00000554131 TPPP3Q9BW30 176 aa12.92□□□□□ -0.34
PSEN1-210ENST00000554131 MSRB1Q9NZV6 116 aa12.92□□□□□ -0.34
PSEN1-210ENST00000554131 SMIM27A0A1W2PRY6 76 aa12.91□□□□□ -0.34
PSEN1-210ENST00000554131 A8MWV9 139 aa12.91□□□□□ -0.34
PSEN1-210ENST00000554131 CRYGDP07320 174 aa12.91□□□□□ -0.34
PSEN1-210ENST00000554131 TENM2Q9NT68 2774 aa12.9□□□□□ -0.34
PSEN1-210ENST00000554131 HIGD1CA8MV81 97 aa12.9□□□□□ -0.34
PSEN1-210ENST00000554131 CACNG7P62955 275 aa12.9□□□□□ -0.34
PSEN1-210ENST00000554131 SPANXN1Q5VSR9 72 aa12.9□□□□□ -0.34
PSEN1-210ENST00000554131 TMEM88Q6PEY1 159 aa12.9□□□□□ -0.34
PSEN1-210ENST00000554131 VSIG2Q96IQ7 327 aa12.9□□□□□ -0.34
PSEN1-210ENST00000554131 KIF25-AS1Q9Y6Z4 181 aa12.9□□□□□ -0.34
PSEN1-210ENST00000554131 NTF3P20783 257 aa12.89□□□□□ -0.35
PSEN1-210ENST00000554131 ZFP2Q6ZN57 461 aa12.89□□□□□ -0.35
PSEN1-210ENST00000554131 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
PSEN1-210ENST00000554131 FAM210BQ96KR6 192 aa12.89□□□□□ -0.35
PSEN1-210ENST00000554131 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
PSEN1-210ENST00000554131 IGLL5B9A064 214 aa12.88□□□□□ -0.35
PSEN1-210ENST00000554131 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
PSEN1-210ENST00000554131 CIDEAO60543 219 aa12.88□□□□□ -0.35
PSEN1-210ENST00000554131 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
PSEN1-210ENST00000554131 CRYBA4P53673 196 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms