RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 IRGMA1A4Y4 181 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 DPRXA6NFQ7 191 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 A8MWL6 223 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 IGLL5B9A064 214 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 BUB1B-PAK6H3BSN5 160 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 SYS1-DBNDD2H3BUS1 97 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 COX7A2LO14548 114 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 GNGT2O14610 69 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 NUPR1O60356 82 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 OR1I1O60431 355 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 SOD1P00441 154 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 C1QAP02745 245 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 CD3DP04234 171 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 IL5P05113 134 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 GYPBP06028 91 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 FABP2P12104 132 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 INPP1P49441 399 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 PSMB2P49721 201 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 ZNF345Q14585 488 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 ETDBQ3ZM63 59 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 LUZP6Q538Z0 58 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 EBLN2Q6P2I7 272 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 Q6ZQT7 251 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 COMMD6Q7Z4G1 85 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 GPHB5Q86YW7 130 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 SBSPONQ8IVN8 264 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 MORN4Q8NDC4 146 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 OR8A1Q8NGG7 326 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 MRPL30Q8TCC3 161 aaKnown RBP1.25□□□□□ -2.21
VRK1-202ENST00000553683 H1FXQ92522 213 aaKnown RBP1.25□□□□□ -2.21
VRK1-202ENST00000553683 FGF13Q92913 245 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 TOMM6Q96B49 74 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 LINC01600Q96MT4 127 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 DSCR8Q96T75 97 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 EIF5A2Q9GZV4 153 aaKnown RBP1.25□□□□□ -2.21
VRK1-202ENST00000553683 SLC35B3Q9H1N7 401 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 SMDT1Q9H4I9 107 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 PLEKHF2Q9H8W4 249 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 ZNF286AQ9HBT8 521 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 TXNL4BQ9NX01 149 aaKnown RBP1.25□□□□□ -2.21
VRK1-202ENST00000553683 FMN2Q9NZ56 1722 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 PLCH1Q4KWH8 1693 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 CTTNBP2Q8WZ74 1663 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 QRICH2Q9H0J4 1663 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 PAPPAQ13219 1627 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 DOCK3Q8IZD9 2030 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 SPTBN2O15020 2390 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 MYH3P11055 1940 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 ATG2AQ2TAZ0 1938 aa1.25□□□□□ -2.21
VRK1-202ENST00000553683 UTP20O75691 2785 aaKnown RBP1.25□□□□□ -2.21
VRK1-202ENST00000553683 BIRC6Q9NR09 4857 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 C1orf167Q5SNV9 1468 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 WDFY3Q8IZQ1 3526 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 PHIPQ8WWQ0 1821 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 FLNAP21333 2647 aaKnown RBP1.24□□□□□ -2.21
VRK1-202ENST00000553683 KIDINS220Q9ULH0 1771 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 PEAK1Q9H792 1746 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 COL4A5P29400 1685 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 COL4A6Q14031 1691 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 TRAV9-1A0A075B6T8 112 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 IGKV1-9A0A0C4DH69 117 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 SNRPGP15A8MWD9 76 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 H3BUT2 72 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 TMEM256-PLSCR3K7ERE1 68 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 UBE2L6O14933 153 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 NDUFB3O43676 98 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 SSSCA1O60232 199 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 SNCGO76070 127 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 CST7O76096 145 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 LTAP01374 205 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 IGKV1-5P01602 117 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 IGLV2-8P01709 118 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 CD7P09564 240 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 COX6A1P12074 109 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 TPT1P13693 172 aaKnown RBP1.24□□□□□ -2.21
VRK1-202ENST00000553683 LSM3P62310 102 aaKnown RBP1.24□□□□□ -2.21
VRK1-202ENST00000553683 SNRPD3P62318 126 aaKnown RBP1.24□□□□□ -2.21
VRK1-202ENST00000553683 HBBP68871 147 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 MRPS36P82909 103 aaKnown RBP1.24□□□□□ -2.21
VRK1-202ENST00000553683 CDK5R1Q15078 307 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 PMCHL1Q16048 86 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 TMEM155Q4W5P6 130 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 FAM104BQ5XKR9 115 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 ZNF322Q6U7Q0 402 aaPredicted RBP1.24□□□□□ -2.21
VRK1-202ENST00000553683 C15orf53Q8NAA6 179 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 OR5H2Q8NGV7 314 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 C10orf105Q8TEF2 133 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 RNASE6Q93091 150 aaKnown RBP1.24□□□□□ -2.21
VRK1-202ENST00000553683 DIRC1Q969H9 104 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 RAB37Q96AX2 223 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 ZNF492Q9P255 531 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 CKLFQ9UBR5 152 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 PTPRFP10586 1907 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 SAMD9Q5K651 1589 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 SBF1O95248 1867 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 ABCC6O95255 1503 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 ARHGAP5Q13017 1502 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 SYCP2Q9BX26 1530 aa1.24□□□□□ -2.21
VRK1-202ENST00000553683 ANKHD1Q8IWZ3 2542 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms