RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 TMEM208Q9BTX3 173 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 MSRB1Q9NZV6 116 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 MDFICQ9P1T7 246 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 ZMAT5Q9UDW3 170 aaKnown RBP12.81□□□□□ -0.36
PSEN1-206ENST00000553447 PHLDA3Q9Y5J5 127 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 MUC4Q99102 2169 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 LOC102724200A0A096LPH7 203 aaPredicted RBP12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BKO60814 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BJP06899 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HTN1P15515 57 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BOP23527 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BBP33778 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BDP58876 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BCP62807 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST2H2BEQ16778 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BHQ93079 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BNQ99877 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 HIST1H2BMQ99879 126 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
PSEN1-206ENST00000553447 SPRY2O43597 315 aa12.79□□□□□ -0.36
PSEN1-206ENST00000553447 CSNK1G2-AS1Q8NCQ2 148 aa12.79□□□□□ -0.36
PSEN1-206ENST00000553447 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 G3V4G9 280 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 M0R381 172 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 NXPH4O95158 308 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 PRM2P04554 102 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 KIAA1644Q3SXP7 199 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 SAMD5Q5TGI4 173 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 TMEM191AQ9H0A3 160 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 CMYA5Q8N3K9 4069 aa12.78□□□□□ -0.36
PSEN1-206ENST00000553447 COL6A5A8TX70 2615 aa12.77□□□□□ -0.36
PSEN1-206ENST00000553447 ZNF415Q09FC8 603 aa12.77□□□□□ -0.37
PSEN1-206ENST00000553447 KIR2DL5BA0A0G2JN68 375 aa12.76□□□□□ -0.37
PSEN1-206ENST00000553447 KIR2DL5BA0A0G2JPC4 375 aa12.76□□□□□ -0.37
PSEN1-206ENST00000553447 DMRTA1Q5VZB9 504 aa12.76□□□□□ -0.37
PSEN1-206ENST00000553447 FAM104BQ5XKR9 115 aa12.76□□□□□ -0.37
PSEN1-206ENST00000553447 KIR2DL5AQ8N109 375 aa12.76□□□□□ -0.37
PSEN1-206ENST00000553447 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
PSEN1-206ENST00000553447 KIR2DL5BQ8NHK3 375 aa12.76□□□□□ -0.37
PSEN1-206ENST00000553447 IGHV4-30-4P0DP06 118 aa12.75□□□□□ -0.37
PSEN1-206ENST00000553447 APOC4P55056 127 aa12.75□□□□□ -0.37
PSEN1-206ENST00000553447 ZNF705AQ6ZN79 300 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-206ENST00000553447 SMIM15Q7Z3B0 74 aa12.75□□□□□ -0.37
PSEN1-206ENST00000553447 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
PSEN1-206ENST00000553447 AZU1P20160 251 aa12.74□□□□□ -0.37
PSEN1-206ENST00000553447 EVI2AP22794 236 aa12.74□□□□□ -0.37
PSEN1-206ENST00000553447 SRIP30626 198 aa12.74□□□□□ -0.37
PSEN1-206ENST00000553447 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
PSEN1-206ENST00000553447 SYT8Q8NBV8 401 aa12.74□□□□□ -0.37
PSEN1-206ENST00000553447 GSN-AS1Q9NRJ2 163 aa12.74□□□□□ -0.37
PSEN1-206ENST00000553447 S100A6P06703 90 aa12.73□□□□□ -0.37
PSEN1-206ENST00000553447 NDUFA6P56556 154 aa12.73□□□□□ -0.37
PSEN1-206ENST00000553447 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
PSEN1-206ENST00000553447 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
PSEN1-206ENST00000553447 RCHY1Q96PM5 261 aa12.73□□□□□ -0.37
PSEN1-206ENST00000553447 ALKBH7Q9BT30 221 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-206ENST00000553447 ANK2Q01484 3957 aa12.72□□□□□ -0.37
PSEN1-206ENST00000553447 RAB4AP20338 218 aa12.72□□□□□ -0.37
PSEN1-206ENST00000553447 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
PSEN1-206ENST00000553447 RNASE8Q8TDE3 154 aaKnown RBP12.72□□□□□ -0.37
PSEN1-206ENST00000553447 TMEM263Q8WUH6 116 aaKnown RBP12.72□□□□□ -0.37
PSEN1-206ENST00000553447 SPXQ9BT56 116 aa12.72□□□□□ -0.37
PSEN1-206ENST00000553447 A8MZ25 164 aa12.71□□□□□ -0.37
PSEN1-206ENST00000553447 M0R2P5 195 aa12.71□□□□□ -0.37
PSEN1-206ENST00000553447 ZNF876PQ49A33 203 aa12.71□□□□□ -0.37
PSEN1-206ENST00000553447 IL17DQ8TAD2 202 aa12.71□□□□□ -0.37
PSEN1-206ENST00000553447 PTH2Q96A98 100 aa12.71□□□□□ -0.37
PSEN1-206ENST00000553447 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
PSEN1-206ENST00000553447 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
PSEN1-206ENST00000553447 C14orf178Q8N769 122 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-206ENST00000553447 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
PSEN1-206ENST00000553447 U3KQK5 164 aa12.7□□□□□ -0.38
PSEN1-206ENST00000553447 UBE2CO00762 179 aa12.69□□□□□ -0.38
PSEN1-206ENST00000553447 Q0VG73 95 aa12.69□□□□□ -0.38
PSEN1-206ENST00000553447 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
PSEN1-206ENST00000553447 JPT2Q9H910 190 aa12.69□□□□□ -0.38
PSEN1-206ENST00000553447 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
PSEN1-206ENST00000553447 C5orf52A6NGY3 159 aa12.68□□□□□ -0.38
PSEN1-206ENST00000553447 D6R8Y8 96 aa12.68□□□□□ -0.38
PSEN1-206ENST00000553447 SNRPEP62304 92 aaKnown RBP12.68□□□□□ -0.38
PSEN1-206ENST00000553447 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
PSEN1-206ENST00000553447 COA6Q5JTJ3 125 aaKnown RBP12.68□□□□□ -0.38
PSEN1-206ENST00000553447 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
PSEN1-206ENST00000553447 C18orf32Q8TCD1 76 aa12.68□□□□□ -0.38
PSEN1-206ENST00000553447 PPBPP02775 128 aa12.67□□□□□ -0.38
PSEN1-206ENST00000553447 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
PSEN1-206ENST00000553447 CKS2P33552 79 aa12.67□□□□□ -0.38
PSEN1-206ENST00000553447 DEFB135Q30KP9 77 aa12.67□□□□□ -0.38
PSEN1-206ENST00000553447 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 SMIM9A6NGZ8 99 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 SMKR1H3BMG3 65 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 NCR2O95944 276 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 MGPP08493 103 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 LINC00315P59091 139 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 IQCJQ1A5X6 159 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-206ENST00000553447 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms