RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 TIMM8BQ9Y5J9 83 aaPredicted RBP7□□□□□ -1.29
TMEM260-204ENST00000553335 TEX48A0A1B0GUV7 120 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 A0A1W2PPQ1 181 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 LYRM9A8MSI8 78 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 ARMS2P0C7Q2 107 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 EMP1P54849 157 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 DAZ2Q13117 558 aaKnown RBP6.99□□□□□ -1.29
TMEM260-204ENST00000553335 RNF212Q495C1 297 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 CTDSP1Q9GZU7 261 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 GSN-AS1Q9NRJ2 163 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 V9GYV3 84 aa6.99□□□□□ -1.29
TMEM260-204ENST00000553335 A0A0J9YWU9 116 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 FAM231BA6NCW3 169 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 F2Z2F3 143 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 H3BVH4 76 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 DEFB4AO15263 64 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 OR5AL1P0C617 328 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 GZMBP10144 247 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 RNASE3P12724 160 aaKnown RBP6.98□□□□□ -1.29
TMEM260-204ENST00000553335 RHEBQ15382 184 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 FER1L6-AS1Q8NA97 138 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 SYT8Q8NBV8 401 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 IL17DQ8TAD2 202 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 TSKUQ8WUA8 353 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 BORCS7Q96B45 105 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 C9orf85Q96MD7 179 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 NOP10Q9NPE3 64 aaKnown RBP6.98□□□□□ -1.29
TMEM260-204ENST00000553335 PHLDA3Q9Y5J5 127 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 U3KQK5 164 aa6.98□□□□□ -1.29
TMEM260-204ENST00000553335 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
TMEM260-204ENST00000553335 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
TMEM260-204ENST00000553335 PLAC8L1A1L4L8 177 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 CXorf65A6NEN9 183 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 M0R2P5 195 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 SNAI2O43623 268 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 SPINK4O60575 86 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 IGLC6P0CF74 106 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 LGALS9BQ3B8N2 356 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 FAM222AQ5U5X8 452 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 TPPP3Q9BW30 176 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 RPS10P5Q9NQ39 176 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 DKK2Q9UBU2 259 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
TMEM260-204ENST00000553335 A0A087WWC5 75 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 SMIM27A0A1W2PRY6 76 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 C7orf77A4D0Y5 90 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 FOXA3P55318 350 aaPredicted RBP6.96□□□□□ -1.3
TMEM260-204ENST00000553335 CACNG7P62955 275 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 ZNF876PQ49A33 203 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 SPANXN1Q5VSR9 72 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 LYZL1Q6UWQ5 148 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 ZFP82Q8N141 532 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 PTH2Q96A98 100 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 NDUFAF3Q9BU61 184 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 SCRT2Q9NQ03 307 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 TMEM242Q9NWH2 141 aa6.96□□□□□ -1.3
TMEM260-204ENST00000553335 MUC4Q99102 2169 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 M0R381 172 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 GAGE7O76087 117 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 GAGE12FP0CL80 117 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 GAGE12GP0CL81 117 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 GAGE12IP0CL82 117 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 DAD1P61803 113 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 PIK3CD-AS1Q5SR53 167 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 WDR73Q6P4I2 378 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 KCNIP4Q6PIL6 250 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 C11orf45Q8TAV5 145 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 GTSF1Q8WW33 167 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 RASL10AQ92737 203 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 IMMP2LQ96T52 175 aa6.95□□□□□ -1.3
TMEM260-204ENST00000553335 MRPL16Q9NX20 251 aaKnown RBP6.95□□□□□ -1.3
TMEM260-204ENST00000553335 TRGV2A0A075B6R0 118 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 A8MWV9 139 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 DEFB130BP0DP73 79 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 DEFB130AP0DP74 79 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 S100A1P23297 94 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 S100PP25815 95 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 CTRLP40313 264 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 Q6ZTI0 123 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 NUP35Q8NFH5 326 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 CELA1Q9UNI1 258 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 NBEAL2Q6ZNJ1 2754 aa6.94□□□□□ -1.3
TMEM260-204ENST00000553335 IGHV4-4A0A075B6R2 117 aa6.93□□□□□ -1.3
TMEM260-204ENST00000553335 A0A1B0GUT8 65 aa6.93□□□□□ -1.3
TMEM260-204ENST00000553335 CIDEAO60543 219 aa6.93□□□□□ -1.3
TMEM260-204ENST00000553335 TRGC1P0CF51 173 aa6.93□□□□□ -1.3
TMEM260-204ENST00000553335 NTF3P20783 257 aa6.93□□□□□ -1.3
TMEM260-204ENST00000553335 SSTP61278 116 aa6.93□□□□□ -1.3
TMEM260-204ENST00000553335 RIGQ13278 110 aa6.93□□□□□ -1.3
TMEM260-204ENST00000553335 TWIST1Q15672 202 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms