RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 C18orf32Q8TCD1 76 aa14.38□□□□□ -0.11
RBFOX1-215ENST00000553186 TMEM191AQ9H0A3 160 aa14.38□□□□□ -0.11
RBFOX1-215ENST00000553186 PRIMA1Q86XR5 153 aa14.37□□□□□ -0.11
RBFOX1-215ENST00000553186 AMN1Q8IY45 258 aa14.37□□□□□ -0.11
RBFOX1-215ENST00000553186 DMRTA1Q5VZB9 504 aa14.37□□□□□ -0.11
RBFOX1-215ENST00000553186 TIMM8BQ9Y5J9 83 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-215ENST00000553186 SPRY2O43597 315 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 CACNG7P62955 275 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 TRPT1Q86TN4 253 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 BAGE3Q86Y29 109 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 LURAP1LQ8IV03 231 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 STHQ8IWL8 128 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 OR10D4PQ8NGN7 298 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 IGHV1OR15-1A0A075B7D0 117 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 SERF1AO75920 110 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 INSL3P51460 131 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 SPANXN1Q5VSR9 72 aa14.36□□□□□ -0.11
RBFOX1-215ENST00000553186 Q8N1Y9 231 aa14.35□□□□□ -0.11
RBFOX1-215ENST00000553186 RCHY1Q96PM5 261 aa14.35□□□□□ -0.11
RBFOX1-215ENST00000553186 HIST1H2BLQ99880 126 aa14.35□□□□□ -0.11
RBFOX1-215ENST00000553186 ESDP10768 282 aa14.34□□□□□ -0.11
RBFOX1-215ENST00000553186 IQCJQ1A5X6 159 aa14.34□□□□□ -0.11
RBFOX1-215ENST00000553186 NOTCH3Q9UM47 2321 aa14.34□□□□□ -0.11
RBFOX1-215ENST00000553186 IGHV3-16A0A0C4DH30 117 aa14.34□□□□□ -0.11
RBFOX1-215ENST00000553186 RNF185Q96GF1 192 aa14.34□□□□□ -0.11
RBFOX1-215ENST00000553186 WFDC10AQ9H1F0 79 aa14.34□□□□□ -0.11
RBFOX1-215ENST00000553186 PHLDA3Q9Y5J5 127 aa14.34□□□□□ -0.11
RBFOX1-215ENST00000553186 AMBPP02760 352 aa14.33□□□□□ -0.11
RBFOX1-215ENST00000553186 EVI2AP22794 236 aa14.33□□□□□ -0.11
RBFOX1-215ENST00000553186 MRPL51Q4U2R6 128 aaKnown RBP14.33□□□□□ -0.11
RBFOX1-215ENST00000553186 C9orf66Q5T8R8 295 aa14.33□□□□□ -0.11
RBFOX1-215ENST00000553186 U3KQK5 164 aa14.33□□□□□ -0.11
RBFOX1-215ENST00000553186 TRRAPQ9Y4A5 3859 aa14.33□□□□□ -0.12
RBFOX1-215ENST00000553186 FABP4P15090 132 aa14.33□□□□□ -0.12
RBFOX1-215ENST00000553186 MDFICQ9P1T7 246 aa14.33□□□□□ -0.12
RBFOX1-215ENST00000553186 M0R381 172 aa14.32□□□□□ -0.12
RBFOX1-215ENST00000553186 NXPH4O95158 308 aa14.32□□□□□ -0.12
RBFOX1-215ENST00000553186 RAB4AP20338 218 aa14.32□□□□□ -0.12
RBFOX1-215ENST00000553186 WFDC9Q8NEX5 89 aa14.32□□□□□ -0.12
RBFOX1-215ENST00000553186 C9orf85Q96MD7 179 aa14.32□□□□□ -0.12
RBFOX1-215ENST00000553186 ZNF747Q9BV97 191 aa14.32□□□□□ -0.12
RBFOX1-215ENST00000553186 D6R8Y8 96 aa14.31□□□□□ -0.12
RBFOX1-215ENST00000553186 PACRGQ96M98 296 aaPredicted RBP14.3□□□□□ -0.12
RBFOX1-215ENST00000553186 C20orf144Q9BQM9 153 aa14.3□□□□□ -0.12
RBFOX1-215ENST00000553186 XCL2Q9UBD3 114 aa14.3□□□□□ -0.12
RBFOX1-215ENST00000553186 INSP01308 110 aa14.29□□□□□ -0.12
RBFOX1-215ENST00000553186 ORMDL3Q8N138 153 aa14.29□□□□□ -0.12
RBFOX1-215ENST00000553186 URB1-AS1Q96HZ7 61 aa14.29□□□□□ -0.12
RBFOX1-215ENST00000553186 MUC4Q99102 2169 aa14.29□□□□□ -0.12
RBFOX1-215ENST00000553186 CBY3A6NI87 242 aa14.28□□□□□ -0.12
RBFOX1-215ENST00000553186 GIG44P09565 113 aaPredicted RBP14.28□□□□□ -0.12
RBFOX1-215ENST00000553186 NUTF2P61970 127 aaKnown RBP14.28□□□□□ -0.12
RBFOX1-215ENST00000553186 SMIM15Q7Z3B0 74 aa14.28□□□□□ -0.12
RBFOX1-215ENST00000553186 LINC00469Q8N7U9 141 aa14.28□□□□□ -0.12
RBFOX1-215ENST00000553186 TMEM18Q96B42 140 aa14.28□□□□□ -0.12
RBFOX1-215ENST00000553186 TRGV11A0A075B6L2 103 aa14.27□□□□□ -0.12
RBFOX1-215ENST00000553186 PRM2P04554 102 aa14.27□□□□□ -0.12
RBFOX1-215ENST00000553186 LINC00467Q9BRT7 94 aa14.27□□□□□ -0.12
RBFOX1-215ENST00000553186 SMKR1H3BMG3 65 aa14.27□□□□□ -0.13
RBFOX1-215ENST00000553186 GAS8-AS1O95177 125 aa14.27□□□□□ -0.13
RBFOX1-215ENST00000553186 CKS2P33552 79 aa14.27□□□□□ -0.13
RBFOX1-215ENST00000553186 PRELID3AQ96N28 172 aa14.27□□□□□ -0.13
RBFOX1-215ENST00000553186 MCRIP2Q9BUT9 160 aaKnown RBP14.27□□□□□ -0.13
RBFOX1-215ENST00000553186 HTN1P15515 57 aa14.26□□□□□ -0.13
RBFOX1-215ENST00000553186 NIT1Q86X76 327 aa14.26□□□□□ -0.13
RBFOX1-215ENST00000553186 NCR2O95944 276 aa14.26□□□□□ -0.13
RBFOX1-215ENST00000553186 PPBPP02775 128 aa14.26□□□□□ -0.13
RBFOX1-215ENST00000553186 C1orf158Q8N1D5 194 aa14.26□□□□□ -0.13
RBFOX1-215ENST00000553186 LINC01587Q99440 93 aa14.26□□□□□ -0.13
RBFOX1-215ENST00000553186 DEFB125Q8N687 156 aa14.25□□□□□ -0.13
RBFOX1-215ENST00000553186 C14orf178Q8N769 122 aaPredicted RBP14.25□□□□□ -0.13
RBFOX1-215ENST00000553186 WIPF1O43516 503 aa14.24□□□□□ -0.13
RBFOX1-215ENST00000553186 NPYP01303 97 aa14.24□□□□□ -0.13
RBFOX1-215ENST00000553186 C3orf56Q8N813 242 aa14.24□□□□□ -0.13
RBFOX1-215ENST00000553186 AP1S3Q96PC3 154 aa14.24□□□□□ -0.13
RBFOX1-215ENST00000553186 IGLL1P15814 213 aa14.24□□□□□ -0.13
RBFOX1-215ENST00000553186 GTSCR1Q86UQ5 136 aa14.24□□□□□ -0.13
RBFOX1-215ENST00000553186 STAB1Q9NY15 2570 aa14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 RPL35AP18077 110 aaKnown RBP14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 RNASEKQ6P5S7 137 aaKnown RBP14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 DPH3P1Q9H4G8 78 aa14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 KIF25-AS1Q9Y6Z4 181 aa14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 LINC00614P0C842 121 aa14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 SAMD10Q9BYL1 202 aa14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 JPT2Q9H910 190 aa14.23□□□□□ -0.13
RBFOX1-215ENST00000553186 TRAV26-2A0A0B4J265 109 aa14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 GATA1P15976 413 aaPredicted RBP14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 LINC00315P59091 139 aa14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 SHISA2Q6UWI4 295 aa14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 C11orf72Q8NBR9 251 aa14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 CHCHD1Q96BP2 118 aaKnown RBP14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 FAM19A2Q8N3H0 131 aa14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 LAMTOR2Q9Y2Q5 125 aa14.22□□□□□ -0.13
RBFOX1-215ENST00000553186 HSBP1O75506 76 aa14.21□□□□□ -0.13
RBFOX1-215ENST00000553186 AMTP48728 403 aa14.21□□□□□ -0.13
RBFOX1-215ENST00000553186 DEFA6Q01524 100 aa14.21□□□□□ -0.13
RBFOX1-215ENST00000553186 TNFRSF6BO95407 300 aa14.2□□□□□ -0.14
RBFOX1-215ENST00000553186 PMCHP20382 165 aa14.2□□□□□ -0.14
RBFOX1-215ENST00000553186 MORN3Q6PF18 240 aaPredicted RBP14.2□□□□□ -0.14
RBFOX1-215ENST00000553186 POM121L12Q8N7R1 296 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms