RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 RNF11Q9Y3C5 154 aa1.62□□□□□ -2.15
RAB3IP-217ENST00000552610 MYO18BQ8IUG5 2567 aa1.62□□□□□ -2.15
RAB3IP-217ENST00000552610 CHD9Q3L8U1 2897 aa1.62□□□□□ -2.15
RAB3IP-217ENST00000552610 CACNA1EQ15878 2313 aa1.62□□□□□ -2.15
RAB3IP-217ENST00000552610 FLNBO75369 2602 aaKnown RBP1.62□□□□□ -2.15
RAB3IP-217ENST00000552610 TRIOO75962 3097 aa1.62□□□□□ -2.15
RAB3IP-217ENST00000552610 SPTA1P02549 2419 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 CFAP54Q96N23 3096 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 TANC1Q9C0D5 1861 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 C5orf42Q9H799 3197 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 TRDV1A0A1B0GX56 115 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 BCL2P10415 239 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 DR1Q01658 176 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 C1orf134Q5TEV5 83 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 GDF5OSQ5U4N7 250 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 FAM19A2Q8N3H0 131 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 RAB37Q96AX2 223 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 OTORQ9NRC9 128 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 NAT8BQ9UHF3 227 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 ASB4Q9Y574 426 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 MYO18AQ92614 2054 aaKnown RBP1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 ZNF292O60281 2723 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 CEP295Q9C0D2 2601 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 NAV2Q8IVL1 2488 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 WDFY4Q6ZS81 3184 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 ZFYVE26Q68DK2 2539 aa1.61□□□□□ -2.15
RAB3IP-217ENST00000552610 CHD6Q8TD26 2715 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 ASCC3Q8N3C0 2202 aaKnown RBP1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 POLEQ07864 2286 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 H0YJX3 145 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 K7ERJ3 54 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 KPNA4O00629 521 aaPredicted RBP1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 IGLV1-51P01701 117 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 CXCL8P10145 99 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 ARPINQ7Z6K5 226 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 OR5AS1Q8N127 324 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 LRRC18Q8N456 261 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 FAM216BQ8N7L0 139 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 BORCS5Q969J3 196 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 CARD19Q96LW7 228 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 TNRC6BQ9UPQ9 1833 aaKnown RBP1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 XIRP2A4UGR9 3374 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 PLXNA4Q9HCM2 1894 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 IGF2RP11717 2491 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 APC2O95996 2303 aa1.6□□□□□ -2.15
RAB3IP-217ENST00000552610 AHCTF1Q8WYP5 2266 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 TRBV6-4A0A1B0GX49 114 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 hDV103S1A0JD37 113 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 ARL5CA6NH57 179 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 B4DSR2 109 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 NDUFA6P56556 154 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 EIF3IQ13347 325 aaKnown RBP1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 TEN1Q86WV5 123 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 THEM6Q8WUY1 208 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 LINC00052Q96N35 136 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 ODF3Q96PU9 254 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 EFCAB11Q9BUY7 163 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 LRTM1Q9HBL6 345 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 TAS2R7Q9NYW3 318 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 ZFP30Q9Y2G7 519 aa1.59□□□□□ -2.15
RAB3IP-217ENST00000552610 SPTAN1Q13813 2472 aaKnown RBP1.59□□□□□ -2.16
RAB3IP-217ENST00000552610 FANCMQ8IYD8 2048 aa1.59□□□□□ -2.16
RAB3IP-217ENST00000552610 ZNF462Q96JM2 2506 aa1.59□□□□□ -2.16
RAB3IP-217ENST00000552610 REV3LO60673 3130 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 CREBBPQ92793 2442 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 IGHV1-58A0A0C4DH39 117 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 GNG14A0A1W2PPG7 69 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 TSTD3H0UI37 97 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 NUPR1O60356 82 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 TMEM128Q5BJH2 165 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 KRTAP26-1Q6PEX3 210 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 OR9Q1Q8NGQ5 310 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 OR10AG1Q8NH19 301 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 SKA2Q8WVK7 121 aaPredicted RBP1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 NBASA2RRP1 2371 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 USP34Q70CQ2 3546 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 ATG2AQ2TAZ0 1938 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 COL4A6Q14031 1691 aa1.58□□□□□ -2.16
RAB3IP-217ENST00000552610 CITO14578 2027 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 USP24Q9UPU5 2620 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 VPS13AQ96RL7 3174 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 CD2P06729 351 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 S100GP29377 79 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 S100A11P31949 105 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 MRPS36P82909 103 aaKnown RBP1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 CIRBPQ14011 172 aaKnown RBP1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 SAMD13Q5VXD3 122 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 OR4B1Q8NGF8 309 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 RMND5BQ96G75 393 aaPredicted RBP1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 LXNQ9BS40 222 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 TMEM14CQ9P0S9 112 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 COL6A6A6NMZ7 2263 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 HELZ2Q9BYK8 2649 aaKnown RBP1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 PTPRQQ9UMZ3 2332 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 SPTBN1Q01082 2364 aaKnown RBP1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 FBN3Q75N90 2809 aa1.57□□□□□ -2.16
RAB3IP-217ENST00000552610 MYLKQ15746 1914 aa1.56□□□□□ -2.16
RAB3IP-217ENST00000552610 KIAA1549Q9HCM3 1950 aa1.56□□□□□ -2.16
RAB3IP-217ENST00000552610 F8W1H4 67 aa1.56□□□□□ -2.16
RAB3IP-217ENST00000552610 GABARAPH6UMI1 98 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms