RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 TRAV8-1A0A0A6YYK1 113 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 IGHV3-16A0A0C4DH30 117 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 KRTAP9-6A0A140TA67 174 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 GGTLC3B5MD39 225 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 MBP02144 154 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 HIST1H1EP10412 219 aaKnown RBP7.69□□□□□ -1.18
PTCH1-222ENST00000551425 TPT1P13693 172 aaKnown RBP7.69□□□□□ -1.18
PTCH1-222ENST00000551425 DAZ4Q86SG3 579 aaKnown RBP7.69□□□□□ -1.18
PTCH1-222ENST00000551425 SLC51BQ86UW2 128 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 SLC25A29Q8N8R3 303 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 OR2G3Q8NGZ4 309 aa7.69□□□□□ -1.18
PTCH1-222ENST00000551425 DAZ3Q9NR90 486 aaKnown RBP7.69□□□□□ -1.18
PTCH1-222ENST00000551425 IGKV2-40A0A087WW87 121 aaPredicted RBP7.68□□□□□ -1.18
PTCH1-222ENST00000551425 M0R2P5 195 aa7.68□□□□□ -1.18
PTCH1-222ENST00000551425 IGKV2D-40P01614 121 aaPredicted RBP7.68□□□□□ -1.18
PTCH1-222ENST00000551425 NKX2-5P52952 324 aaPredicted RBP7.68□□□□□ -1.18
PTCH1-222ENST00000551425 PDE6HQ13956 83 aa7.68□□□□□ -1.18
PTCH1-222ENST00000551425 TMEM183BQ1AE95 376 aa7.68□□□□□ -1.18
PTCH1-222ENST00000551425 EIF5AL1Q6IS14 154 aaKnown RBP7.68□□□□□ -1.18
PTCH1-222ENST00000551425 FAM122CQ6P4D5 195 aa7.68□□□□□ -1.18
PTCH1-222ENST00000551425 TMEM183AQ8IXX5 376 aa7.68□□□□□ -1.18
PTCH1-222ENST00000551425 STOML3Q8TAV4 291 aa7.68□□□□□ -1.18
PTCH1-222ENST00000551425 PRADC1Q9BSG0 188 aa7.68□□□□□ -1.18
PTCH1-222ENST00000551425 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
PTCH1-222ENST00000551425 FBLL1A6NHQ2 334 aaKnown RBP7.67□□□□□ -1.18
PTCH1-222ENST00000551425 SEC11BP0C7V7 166 aa7.67□□□□□ -1.18
PTCH1-222ENST00000551425 ZNF138P52744 262 aa7.67□□□□□ -1.18
PTCH1-222ENST00000551425 RHOHQ15669 191 aa7.67□□□□□ -1.18
PTCH1-222ENST00000551425 EXOC3-AS1Q8N2X6 119 aa7.67□□□□□ -1.18
PTCH1-222ENST00000551425 SH3BGRL3Q9H299 93 aa7.67□□□□□ -1.18
PTCH1-222ENST00000551425 TMEM14CQ9P0S9 112 aa7.67□□□□□ -1.18
PTCH1-222ENST00000551425 IGKV2D-24A0A075B6R9 120 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 A0A1W2PPV4 95 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 C14orf177Q52M58 125 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 GCSAMLQ5JQS6 135 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 AKR1C8PQ5T2L2 129 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 Q6AWC8 147 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 FAM159AQ6UWV7 190 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 OR10G9Q8NGN4 311 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 OR10G7Q8NGN6 311 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 LINC01600Q96MT4 127 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
PTCH1-222ENST00000551425 UMAD1C9J7I0 102 aa7.65□□□□□ -1.18
PTCH1-222ENST00000551425 CIDEAO60543 219 aa7.65□□□□□ -1.18
PTCH1-222ENST00000551425 TAS2R45P59539 299 aa7.65□□□□□ -1.18
PTCH1-222ENST00000551425 RAB2AP61019 212 aa7.65□□□□□ -1.18
PTCH1-222ENST00000551425 ODF1Q14990 250 aa7.65□□□□□ -1.18
PTCH1-222ENST00000551425 Q8TAT8 98 aa7.65□□□□□ -1.18
PTCH1-222ENST00000551425 ACTR3CQ9C0K3 210 aaPredicted RBP7.65□□□□□ -1.18
PTCH1-222ENST00000551425 DPH3P1Q9H4G8 78 aa7.65□□□□□ -1.18
PTCH1-222ENST00000551425 OR10J4P0C629 311 aa7.64□□□□□ -1.19
PTCH1-222ENST00000551425 CDC34P49427 236 aaPredicted RBP7.64□□□□□ -1.19
PTCH1-222ENST00000551425 ATRAIDQ6UW56 229 aa7.64□□□□□ -1.19
PTCH1-222ENST00000551425 MIR17HGQ75NE6 70 aa7.64□□□□□ -1.19
PTCH1-222ENST00000551425 DNAJC30Q96LL9 226 aa7.64□□□□□ -1.19
PTCH1-222ENST00000551425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.64□□□□□ -1.19
PTCH1-222ENST00000551425 PYYP10082 97 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 RAB5CP51148 216 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 KHDC3LQ587J8 217 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 DPPA3Q6W0C5 159 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 TMED6Q8WW62 240 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 PHYHIPLQ96FC7 376 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 SLC25A2Q9BXI2 301 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 OR51M1Q9H341 326 aa7.63□□□□□ -1.19
PTCH1-222ENST00000551425 A0A087WWC5 75 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 CTXND1A0A1B0GTU2 59 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 RBAKDNA6NC62 111 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 PANO1I0J062 215 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 GNRH2O43555 120 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 OR7C2O60412 319 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 CFAP126Q5VTH2 177 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 PQLC2Q6ZP29 291 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 RAB24Q969Q5 203 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 FAM167A-AS1Q96KT0 104 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 LENEPQ9Y5L5 61 aa7.62□□□□□ -1.19
PTCH1-222ENST00000551425 STAG3L2P0CL84 134 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 STAG3L3P0CL85 134 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 LINC00694P0DN24 101 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 MGST1P10620 155 aaKnown RBP7.61□□□□□ -1.19
PTCH1-222ENST00000551425 SULT1A2P50226 295 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 DGAT2L7PQ6IED9 249 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 C9orf163Q8N9P6 203 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 NAGKQ9UJ70 344 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 KLK12Q9UKR0 248 aa7.61□□□□□ -1.19
PTCH1-222ENST00000551425 IGHV3-73A0A0B4J1V6 119 aa7.6□□□□□ -1.19
PTCH1-222ENST00000551425 HMGB3O15347 200 aaKnown RBP7.6□□□□□ -1.19
PTCH1-222ENST00000551425 CXorf1O96002 111 aa7.6□□□□□ -1.19
PTCH1-222ENST00000551425 NBEAP1P0C6P0 100 aa7.6□□□□□ -1.19
PTCH1-222ENST00000551425 CIRBPQ14011 172 aaKnown RBP7.6□□□□□ -1.19
PTCH1-222ENST00000551425 NIT1Q86X76 327 aa7.6□□□□□ -1.19
PTCH1-222ENST00000551425 FAM213BQ8TBF2 198 aa7.6□□□□□ -1.19
PTCH1-222ENST00000551425 URGCP-MRPS24S4R325 110 aa7.6□□□□□ -1.19
PTCH1-222ENST00000551425 FAT4Q6V0I7 4981 aa7.6□□□□□ -1.19
PTCH1-222ENST00000551425 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 MAP1LC3B2A6NCE7 125 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 TEX46H3BTG2 121 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 EIF3GO75821 320 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTCH1-222ENST00000551425 TYMSP04818 313 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 FHITP49789 147 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 KRTAP10-8P60410 259 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms