RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IFITM5A6NNB3 132 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 F5H768 121 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 SH2D1AO60880 128 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 MPC2O95563 127 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 LTAP01374 205 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 OR5G3P0C626 314 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 HIST1H1EP10412 219 aaKnown RBP2.25□□□□□ -2.05
LIMA1-205ENST00000550592 FABP4P15090 132 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 HIST1H1CP16403 213 aaKnown RBP2.25□□□□□ -2.05
LIMA1-205ENST00000550592 GPX2P18283 190 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 SULT1A1P50225 295 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 SULT1A2P50226 295 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 LSM3P62310 102 aaKnown RBP2.25□□□□□ -2.05
LIMA1-205ENST00000550592 DEFB136Q30KP8 78 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 MORN2Q502X0 79 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 FAM201AQ5SY85 155 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 OR10K2Q6IF99 312 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 RPL22L1Q6P5R6 122 aaKnown RBP2.25□□□□□ -2.05
LIMA1-205ENST00000550592 CD200R1LQ6Q8B3 271 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 ALKAL2Q6UX46 152 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 LINC00322Q6ZN03 302 aaPredicted RBP2.25□□□□□ -2.05
LIMA1-205ENST00000550592 ZNF563Q8TA94 476 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 SLC25A40Q8TBP6 338 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 GALMQ96C23 342 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 KCTD7Q96MP8 289 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 CIB3Q96Q77 187 aaPredicted RBP2.25□□□□□ -2.05
LIMA1-205ENST00000550592 MAP1LC3BQ9GZQ8 125 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 MRPL16Q9NX20 251 aaKnown RBP2.25□□□□□ -2.05
LIMA1-205ENST00000550592 OR5AC2Q9NZP5 309 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 APLNQ9ULZ1 77 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 PHLDA3Q9Y5J5 127 aa2.25□□□□□ -2.05
LIMA1-205ENST00000550592 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 TRAV38-1A0A0B4J264 116 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 A0A0D9SG52 128 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 ZNF705FA8MVS1 300 aaPredicted RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 ZNF878C9JN71 531 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 FTCDNL1E5RQL4 147 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 M0R1W7 72 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 OVOL1O14753 267 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 LECT2O14960 151 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HMGB3O15347 200 aaKnown RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HAND1O96004 215 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 CFDP00746 253 aaPredicted RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HBZP02008 142 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 APOA2P02652 100 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 SERPINE1P05121 402 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 ZNF705DP0CH99 300 aaPredicted RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 ZNF705BP0CI00 300 aaPredicted RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 ALOX5APP20292 161 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 SNCAP37840 140 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 POLR2HP52434 150 aaKnown RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 EMP1P54849 157 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 CLDN12P56749 244 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 RHOGP84095 191 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 RUNX1Q01196 453 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 SMAGPQ0VAQ4 97 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 C1DQ13901 141 aaKnown RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 EDDM3AQ14507 147 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 XAF1Q6GPH4 301 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 SPATA12Q7Z6I5 190 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HIST3H2BBQ8N257 126 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 FAM24BQ8N5W8 94 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HAVCR2Q8TDQ0 301 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 DEFB104AQ8WTQ1 72 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 MBD3L1Q8WWY6 194 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 AP1S3Q96PC3 154 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 OR4C12Q96R67 309 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HSPB9Q9BQS6 159 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 HIGD2AQ9BW72 106 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 SMIM3Q9BZL3 60 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 DOK5Q9P104 306 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 TNFSF18Q9UNG2 199 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 LSM5Q9Y4Y9 91 aaKnown RBP2.24□□□□□ -2.05
LIMA1-205ENST00000550592 DNAH6Q9C0G6 4158 aa2.24□□□□□ -2.05
LIMA1-205ENST00000550592 PKD1P98161 4303 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 LRP2P98164 4655 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 DNAH5Q8TE73 4624 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 A0A087X0T9 212 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 TMED7-TICAM2A0A0A6YYA0 188 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 A0A1W2PNM2 257 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 MCRIP1C9JLW8 97 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 G3V3Q6 166 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 LYRM1O43325 122 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 MPZL2O60487 215 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 SIX6O95475 246 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 AKAIN1P0CW23 69 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 C8orf88P0DMB2 117 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 SULT1A3P0DMM9 295 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 SULT1A4P0DMN0 295 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 P0DMU3 169 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 FAM231AP0DMU4 169 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 FAM231CP0DMU5 169 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 GZMBP10144 247 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 SDC2P34741 201 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 GUCA1AP43080 201 aaPredicted RBP2.23□□□□□ -2.05
LIMA1-205ENST00000550592 GNG4P50150 75 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 DYNLT3P51808 116 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 DLX6P56179 175 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 RHOBP62745 196 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms