RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LINC01556Q5JQF7 62 aa7.37□□□□□ -1.23
VTI1BP3-201ENST00000550220 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
VTI1BP3-201ENST00000550220 STOML3Q8TAV4 291 aa7.37□□□□□ -1.23
VTI1BP3-201ENST00000550220 SCRT2Q9NQ03 307 aa7.37□□□□□ -1.23
VTI1BP3-201ENST00000550220 ZFP30Q9Y2G7 519 aa7.37□□□□□ -1.23
VTI1BP3-201ENST00000550220 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 HSPG2P98160 4391 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 RNF222A6NCQ9 220 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 PSCAO43653 123 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 RNASE3P12724 160 aaKnown RBP7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 ASIPP42127 132 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 RGS21Q2M5E4 152 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 OR10J3Q5JRS4 329 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 ZNF506Q5JVG8 444 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 LELP1Q5T871 98 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 GTSF1LQ9H1H1 148 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 C11orf21Q9P2W6 132 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 TNFRSF18Q9Y5U5 241 aa7.36□□□□□ -1.23
VTI1BP3-201ENST00000550220 LOC100131303A0A0U1RQF7 123 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 PGPEP1LA6NFU8 196 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 IBA57-AS1B1ANH7 110 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 PEX7O00628 323 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 FHITP49789 147 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 FGF8P55075 233 aaPredicted RBP7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 SYT8Q8NBV8 401 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 ATP6V0E2Q8NHE4 81 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 KRTAP4-5Q9BYR2 181 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 IL36BQ9NZH7 164 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 ARL2-SNX15V9GYD0 113 aa7.35□□□□□ -1.23
VTI1BP3-201ENST00000550220 A0A087WWC5 75 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 TRAV34A0A0B4J273 112 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 IGKV3D-20A0A0C4DH25 116 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 RHODO00212 210 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 LAGE3Q14657 143 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 ZNF726P1Q15940 193 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 LGALSLQ3ZCW2 172 aaPredicted RBP7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 DNLZQ5SXM8 178 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 DPPA3Q6W0C5 159 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 COX8CQ7Z4L0 72 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 NTN5Q8WTR8 489 aaPredicted RBP7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 FMC1Q96HJ9 113 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 LINC00479Q96M42 142 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 TM2D2Q9BX73 214 aa7.34□□□□□ -1.23
VTI1BP3-201ENST00000550220 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 TRBV6-1A0A0K0K1D8 114 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 MAP1LC3B2A6NCE7 125 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 B4DEV8 164 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 ARPC5O15511 151 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 S100A9P06702 114 aaKnown RBP7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 UBE2G2P60604 165 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 UBE2G1P62253 170 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 TOR2AQ5JU69 321 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 FAM162BQ5T6X4 162 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 MAP1LC3BQ9GZQ8 125 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 PARLQ9H300 379 aa7.33□□□□□ -1.24
VTI1BP3-201ENST00000550220 EPM2AB3EWF7 344 aa7.32□□□□□ -1.24
VTI1BP3-201ENST00000550220 UMAD1C9J7I0 102 aa7.32□□□□□ -1.24
VTI1BP3-201ENST00000550220 SEC11BP0C7V7 166 aa7.32□□□□□ -1.24
VTI1BP3-201ENST00000550220 GCSHP23434 173 aa7.32□□□□□ -1.24
VTI1BP3-201ENST00000550220 Q86TA4 180 aa7.32□□□□□ -1.24
VTI1BP3-201ENST00000550220 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 TRAV8-3A0A0A6YYJ7 113 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 KRBOX1C9JBD0 128 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 TPT1P13693 172 aaKnown RBP7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 EIF5AP63241 154 aaKnown RBP7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 ZNF345Q14585 488 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 CST9LP1Q5W188 147 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 OR11H4Q8NGC9 324 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 CYTL1Q9NRR1 136 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 COX11Q9Y6N1 276 aa7.31□□□□□ -1.24
VTI1BP3-201ENST00000550220 IGLV5-52A0A0A0MRZ9 124 aa7.3□□□□□ -1.24
VTI1BP3-201ENST00000550220 LTAP01374 205 aa7.3□□□□□ -1.24
VTI1BP3-201ENST00000550220 ARMS2P0C7Q2 107 aa7.3□□□□□ -1.24
VTI1BP3-201ENST00000550220 ZNF674Q2M3X9 581 aa7.3□□□□□ -1.24
VTI1BP3-201ENST00000550220 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
VTI1BP3-201ENST00000550220 UFSP1Q6NVU6 142 aa7.3□□□□□ -1.24
VTI1BP3-201ENST00000550220 ZC2HC1AQ96GY0 325 aa7.3□□□□□ -1.24
VTI1BP3-201ENST00000550220 A0A0D9SG52 128 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 LRCOL1A6NCL2 159 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 HMSDA8MTL9 139 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 G3V3Q6 166 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 H3BVH4 76 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 SH2D1AO60880 128 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 IGHV3-30P01768 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 IGHV3-33P01772 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 LINC00694P0DN24 101 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 IGHV3-30-3P0DP02 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 IGHV3-30-5P0DP03 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 AKR1C3P42330 323 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 CRIP1P50238 77 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 GAGE1Q13065 139 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 GAGE4Q13068 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 GAGE5Q13069 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 GAGE13Q4V321 117 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 Q6ZSN1 163 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 ZFP82Q8N141 532 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 KCNRGQ8N5I3 272 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms