RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, human

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A1-208	ENST00000550173	IGHV3-33	P01772	117 aa		13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	INAFM2	P0DMQ5	153 aa		13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	IGHV3-30-3	P0DP02	117 aa		13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	IGHV3-30-5	P0DP03	117 aa		13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	RNASE3	P12724	160 aa	Known RBP	13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	LELP1	Q5T871	98 aa		13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	ATP6V0E2	Q8NHE4	81 aa		13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	FRZB	Q92765	325 aa		13.34	□□□□□ -0.27
SLC38A1-208	ENST00000550173	LRCOL1	A6NCL2	159 aa		13.33	□□□□□ -0.28
SLC38A1-208	ENST00000550173	MGST1	P10620	155 aa	Known RBP	13.33	□□□□□ -0.28
SLC38A1-208	ENST00000550173		Q5BKY6	102 aa		13.33	□□□□□ -0.28
SLC38A1-208	ENST00000550173	GTSF1L	Q9H1H1	148 aa		13.33	□□□□□ -0.28
SLC38A1-208	ENST00000550173	IGLV5-52	A0A0A0MRZ9	124 aa		13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173	TRAV34	A0A0B4J273	112 aa		13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173		A0A1W2PRE2	83 aa		13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173	PTTG1	O95997	202 aa		13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173	S100A4	P26447	101 aa	Known RBP	13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173		Q5VSD8	79 aa		13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173	LINC00479	Q96M42	142 aa		13.32	□□□□□ -0.28
SLC38A1-208	ENST00000550173	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.31	□□□□□ -0.28
SLC38A1-208	ENST00000550173	IFNA7	P01567	189 aa		13.31	□□□□□ -0.28
SLC38A1-208	ENST00000550173	RPL7L1	Q6DKI1	246 aa	Known RBP	13.31	□□□□□ -0.28
SLC38A1-208	ENST00000550173	NTN5	Q8WTR8	489 aa	Predicted RBP	13.31	□□□□□ -0.28
SLC38A1-208	ENST00000550173	IGKV3D-20	A0A0C4DH25	116 aa		13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	FABP5P3	A8MUU1	101 aa		13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	SMR3B	P02814	79 aa	Predicted RBP	13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	GIP	P09681	153 aa	Predicted RBP	13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	PARL	Q9H300	379 aa		13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	BATF3	Q9NR55	127 aa		13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	ARL2-SNX15	V9GYD0	113 aa		13.3	□□□□□ -0.28
SLC38A1-208	ENST00000550173	FXYD6-FXYD2	A0A087WZ82	144 aa		13.29	□□□□□ -0.28
SLC38A1-208	ENST00000550173		A8MWV9	139 aa		13.29	□□□□□ -0.28
SLC38A1-208	ENST00000550173	ASIP	P42127	132 aa		13.29	□□□□□ -0.28
SLC38A1-208	ENST00000550173	UBE2G2	P60604	165 aa		13.29	□□□□□ -0.28
SLC38A1-208	ENST00000550173	ZNF726P1	Q15940	193 aa		13.29	□□□□□ -0.28
SLC38A1-208	ENST00000550173		Q6ZSN1	163 aa		13.29	□□□□□ -0.28
SLC38A1-208	ENST00000550173	CTXND1	A0A1B0GTU2	59 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	RNF222	A6NCQ9	220 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	GAGE12J	A6NER3	117 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	HAMP	P81172	84 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	GAGE1	Q13065	139 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	GAGE4	Q13068	117 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	GAGE5	Q13069	117 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	GAGE13	Q4V321	117 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	ZFP2	Q6ZN57	461 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173		Q8N814	137 aa		13.28	□□□□□ -0.28
SLC38A1-208	ENST00000550173	PEX7	O00628	323 aa		13.27	□□□□□ -0.29
SLC38A1-208	ENST00000550173	PIK3CD-AS1	Q5SR53	167 aa		13.27	□□□□□ -0.29
SLC38A1-208	ENST00000550173	OR2T35	Q8NGX2	323 aa		13.27	□□□□□ -0.29
SLC38A1-208	ENST00000550173		B4DEV8	164 aa		13.26	□□□□□ -0.29
SLC38A1-208	ENST00000550173	FGF8	P55075	233 aa	Predicted RBP	13.26	□□□□□ -0.29
SLC38A1-208	ENST00000550173	LAGE3	Q14657	143 aa		13.26	□□□□□ -0.29
SLC38A1-208	ENST00000550173		Q86TA4	180 aa		13.26	□□□□□ -0.29
SLC38A1-208	ENST00000550173	TMEM70	Q9BUB7	260 aa		13.26	□□□□□ -0.29
SLC38A1-208	ENST00000550173	TM2D2	Q9BX73	214 aa		13.26	□□□□□ -0.29
SLC38A1-208	ENST00000550173	JPT2	Q9H910	190 aa		13.26	□□□□□ -0.29
SLC38A1-208	ENST00000550173	AKR1C8P	Q5T2L2	129 aa		13.25	□□□□□ -0.29
SLC38A1-208	ENST00000550173	IL36B	Q9NZH7	164 aa		13.25	□□□□□ -0.29
SLC38A1-208	ENST00000550173	FAM74A7	A6NL05	159 aa		13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173	FAM229A	H3BQW9	127 aa		13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173		H3BVH4	76 aa		13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173	LINC00694	P0DN24	101 aa		13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173		Q8N3U1	123 aa		13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173	HIST1H2BA	Q96A08	127 aa		13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173	SAMD10	Q9BYL1	202 aa		13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173	NKX6-2	Q9C056	277 aa	Predicted RBP	13.24	□□□□□ -0.29
SLC38A1-208	ENST00000550173	DMRTA1	Q5VZB9	504 aa		13.23	□□□□□ -0.29
SLC38A1-208	ENST00000550173	C14orf178	Q8N769	122 aa	Predicted RBP	13.23	□□□□□ -0.29
SLC38A1-208	ENST00000550173	SYT8	Q8NBV8	401 aa		13.23	□□□□□ -0.29
SLC38A1-208	ENST00000550173	ZC2HC1A	Q96GY0	325 aa		13.23	□□□□□ -0.29
SLC38A1-208	ENST00000550173		Q9UF83	564 aa		13.23	□□□□□ -0.29
SLC38A1-208	ENST00000550173	TRAV8-3	A0A0A6YYJ7	113 aa		13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173	GRIFIN	A4D1Z8	144 aa		13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173		M0R036	132 aa		13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173	ARMS2	P0C7Q2	107 aa		13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173	UFSP1	Q6NVU6	142 aa		13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173	DAZ4	Q86SG3	579 aa	Known RBP	13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173	DAZ3	Q9NR90	486 aa	Known RBP	13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173	ZFP30	Q9Y2G7	519 aa		13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173	VPS13B	Q7Z7G8	4022 aa		13.22	□□□□□ -0.29
SLC38A1-208	ENST00000550173		A0A087WWC5	75 aa		13.21	□□□□□ -0.29
SLC38A1-208	ENST00000550173	KRBOX1	C9JBD0	128 aa		13.21	□□□□□ -0.29
SLC38A1-208	ENST00000550173	RHOD	O00212	210 aa		13.21	□□□□□ -0.29
SLC38A1-208	ENST00000550173	SH2D1A	O60880	128 aa		13.21	□□□□□ -0.29
SLC38A1-208	ENST00000550173	CRIP1	P50238	77 aa		13.21	□□□□□ -0.29
SLC38A1-208	ENST00000550173	DNLZ	Q5SXM8	178 aa		13.21	□□□□□ -0.29
SLC38A1-208	ENST00000550173	OR11H4	Q8NGC9	324 aa		13.21	□□□□□ -0.29
SLC38A1-208	ENST00000550173	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	FAT1	Q14517	4588 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	MAP1LC3B2	A6NCE7	125 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	UBE2G1	P62253	170 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	WFDC2	Q14508	124 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	TOR2A	Q5JU69	321 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	FAM74A4	Q5TZK3	123 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	MAP1LC3B	Q9GZQ8	125 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	FAM30A	Q9NZY2	134 aa		13.2	□□□□□ -0.3
SLC38A1-208	ENST00000550173	FAM162B	Q5T6X4	162 aa		13.19	□□□□□ -0.3
SLC38A1-208	ENST00000550173	FMC1	Q96HJ9	113 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms