RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 H7C2G1 150 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 IGKCP01834 107 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 SMAGPQ0VAQ4 97 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 C19orf54Q5BKX5 351 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 H3BMG7 143 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 PRM2P04554 102 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 LRRC75A-AS1Q8N1F1 130 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 OR9G4Q8NGQ1 327 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
LINC00661-204ENST00000549354 BEX4Q9NWD9 120 aaPredicted RBP8.47□□□□□ -1.05
LINC00661-204ENST00000549354 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
LINC00661-204ENST00000549354 A0A087WWL8 130 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 GNRH2O43555 120 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 BLCAPP62952 87 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 TMEM190Q8WZ59 177 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 HHLA3Q9XRX5 114 aa8.47□□□□□ -1.05
LINC00661-204ENST00000549354 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.05
LINC00661-204ENST00000549354 TMEM238C9JI98 176 aa8.46□□□□□ -1.05
LINC00661-204ENST00000549354 WFDC2Q14508 124 aa8.46□□□□□ -1.05
LINC00661-204ENST00000549354 S100A7AQ86SG5 101 aa8.46□□□□□ -1.05
LINC00661-204ENST00000549354 OR4X2Q8NGF9 303 aa8.46□□□□□ -1.05
LINC00661-204ENST00000549354 NPFFR1Q9GZQ6 430 aa8.46□□□□□ -1.05
LINC00661-204ENST00000549354 IGHV3-73A0A0B4J1V6 119 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 IGHV4-38-2P0DP08 117 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 MOB4Q9Y3A3 225 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 U3KQK5 164 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 GCN1Q92616 2671 aaKnown RBP8.46□□□□□ -1.06
LINC00661-204ENST00000549354 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 PDE6HQ13956 83 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 C10orf99Q6UWK7 81 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 CYSLTR1Q9Y271 337 aa8.46□□□□□ -1.06
LINC00661-204ENST00000549354 G3V4G9 280 aa8.45□□□□□ -1.06
LINC00661-204ENST00000549354 J3QLI3 93 aa8.45□□□□□ -1.06
LINC00661-204ENST00000549354 IGLC6P0CF74 106 aa8.45□□□□□ -1.06
LINC00661-204ENST00000549354 ETDBQ3ZM63 59 aa8.45□□□□□ -1.06
LINC00661-204ENST00000549354 LINC01356Q8N9X3 169 aa8.45□□□□□ -1.06
LINC00661-204ENST00000549354 BRI3O95415 125 aa8.45□□□□□ -1.06
LINC00661-204ENST00000549354 FLNAP21333 2647 aaKnown RBP8.44□□□□□ -1.06
LINC00661-204ENST00000549354 A6NDX4 124 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 CD300EQ496F6 205 aaPredicted RBP8.44□□□□□ -1.06
LINC00661-204ENST00000549354 PRR9Q5T870 116 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 C11orf44Q8N8P7 122 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 MYOZ3Q8TDC0 251 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 DPM2O94777 84 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 AVPP01185 164 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 KRTAP10-9P60411 292 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 C8orf86Q6ZUL3 223 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 METTL26Q96S19 204 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 ATP6V0BQ99437 205 aa8.44□□□□□ -1.06
LINC00661-204ENST00000549354 ZNF256Q9Y2P7 627 aaPredicted RBP8.44□□□□□ -1.06
LINC00661-204ENST00000549354 HECTD1Q9ULT8 2610 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 TRBV6-1A0A0K0K1D8 114 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.43□□□□□ -1.06
LINC00661-204ENST00000549354 KLHL30-AS1Q8NEE0 82 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 PHLDA3Q9Y5J5 127 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 ITPR3Q14573 2671 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 APOMO95445 188 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 DEFB113Q30KQ7 82 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 CCDC140Q96MF4 163 aa8.43□□□□□ -1.06
LINC00661-204ENST00000549354 SCGB1D4Q6XE38 83 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 BUB3O43684 328 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 FSHBP01225 129 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 INSL3P51460 131 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 NXT2Q9NPJ8 142 aaKnown RBP8.42□□□□□ -1.06
LINC00661-204ENST00000549354 H3BUX3 64 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 RPS20P60866 119 aaKnown RBP8.42□□□□□ -1.06
LINC00661-204ENST00000549354 GATD1Q8NB37 220 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 ZNF479Q96JC4 524 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 ZNF580Q9UK33 172 aa8.42□□□□□ -1.06
LINC00661-204ENST00000549354 TSSC4Q9Y5U2 329 aaPredicted RBP8.42□□□□□ -1.06
LINC00661-204ENST00000549354 TRAV12-3A0A0B4J271 114 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 ZNF688P0C7X2 276 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
LINC00661-204ENST00000549354 C20orf173Q96LM9 149 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 DUX3Q96PT4 197 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 SCGB2A1O75556 95 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 ATP5G2Q06055 141 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 CEND1Q8N111 149 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 IGHG2P01859 326 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 LAGE3Q14657 143 aa8.41□□□□□ -1.06
LINC00661-204ENST00000549354 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
LINC00661-204ENST00000549354 AZU1P20160 251 aa8.4□□□□□ -1.06
LINC00661-204ENST00000549354 C9orf139Q6ZV77 190 aa8.4□□□□□ -1.06
LINC00661-204ENST00000549354 ZNF418Q8TF45 676 aaPredicted RBP8.4□□□□□ -1.06
LINC00661-204ENST00000549354 KMT2BQ9UMN6 2715 aaPredicted RBP8.4□□□□□ -1.06
LINC00661-204ENST00000549354 NPC2P61916 151 aa8.4□□□□□ -1.07
LINC00661-204ENST00000549354 KRTAP1-3Q8IUG1 177 aa8.4□□□□□ -1.07
LINC00661-204ENST00000549354 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.07
LINC00661-204ENST00000549354 SCGB3A1Q96QR1 104 aa8.4□□□□□ -1.07
LINC00661-204ENST00000549354 TRBV7-1A0A0A6YYK4 115 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 TRAV41A0A0B4J266 112 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 H3BUA1 57 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
LINC00661-204ENST00000549354 SRSF9Q13242 221 aaKnown RBP eCLIP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms