RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 OR10G8Q8NGN5 311 aa9.29□□□□□ -0.92
CDX2-202ENST00000548877 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
CDX2-202ENST00000548877 TMEM263Q8WUH6 116 aaKnown RBP9.29□□□□□ -0.92
CDX2-202ENST00000548877 TRBV20OR9-2A0A075B6H5 130 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 C1orf196B1AJZ1 125 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 EREGO14944 169 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 GCGP01275 180 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 TCRAP04437 139 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 HOXA5P20719 270 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 KRTAP10-1P60331 282 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 RAB5BP61020 215 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 OR5I1Q13606 314 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 ELOBQ15370 118 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 BAGE2Q86Y30 109 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 YPEL4Q96NS1 127 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 C20orf144Q9BQM9 153 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 SLC50A1Q9BRV3 221 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 NOP10Q9NPE3 64 aaKnown RBP9.28□□□□□ -0.92
CDX2-202ENST00000548877 OSTCQ9NRP0 149 aa9.28□□□□□ -0.92
CDX2-202ENST00000548877 ERVFC1-1P60608 527 aa9.27□□□□□ -0.93
CDX2-202ENST00000548877 FLI1Q01543 452 aaPredicted RBP9.27□□□□□ -0.93
CDX2-202ENST00000548877 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
CDX2-202ENST00000548877 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
CDX2-202ENST00000548877 IGFL4Q6B9Z1 124 aa9.26□□□□□ -0.93
CDX2-202ENST00000548877 FAM231DQ6ZW35 169 aa9.26□□□□□ -0.93
CDX2-202ENST00000548877 RNF182Q8N6D2 247 aa9.26□□□□□ -0.93
CDX2-202ENST00000548877 ZFP30Q9Y2G7 519 aa9.26□□□□□ -0.93
CDX2-202ENST00000548877 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
CDX2-202ENST00000548877 A0A0J9YY99 117 aa9.25□□□□□ -0.93
CDX2-202ENST00000548877 PFN1P07737 140 aaKnown RBP9.25□□□□□ -0.93
CDX2-202ENST00000548877 MGST1P10620 155 aaKnown RBP9.25□□□□□ -0.93
CDX2-202ENST00000548877 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDX2-202ENST00000548877 CDKN1BP46527 198 aa9.25□□□□□ -0.93
CDX2-202ENST00000548877 MRPL53Q96EL3 112 aaKnown RBP9.25□□□□□ -0.93
CDX2-202ENST00000548877 PYGO2Q9BRQ0 406 aa9.25□□□□□ -0.93
CDX2-202ENST00000548877 A0A087WTM6 91 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 A0A096LPF7 62 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 PGPEP1LA6NFU8 196 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 DIRC3C9JPN6 131 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 FAM229AH3BQW9 127 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 K7EN84 100 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 SIVA1O15304 175 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 LTAP01374 205 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 RPS10P46783 165 aaKnown RBP9.24□□□□□ -0.93
CDX2-202ENST00000548877 GNG5P63218 68 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 IBA57Q5T440 356 aaKnown RBP9.24□□□□□ -0.93
CDX2-202ENST00000548877 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 ZNF738Q8NE65 137 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 VSIG2Q96IQ7 327 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 IL36BQ9NZH7 164 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 MDFICQ9P1T7 246 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 ZNF492Q9P255 531 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 RPH3ALQ9UNE2 315 aa9.24□□□□□ -0.93
CDX2-202ENST00000548877 H3BTX0 84 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 IGLV2-8P01709 118 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 TYMSP04818 313 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 SNRPCP09234 159 aaKnown RBP9.23□□□□□ -0.93
CDX2-202ENST00000548877 HTN1P15515 57 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 HIST1H1AQ02539 215 aaPredicted RBP9.23□□□□□ -0.93
CDX2-202ENST00000548877 PSG3Q16557 428 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 COX19Q49B96 90 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 Q86TA4 180 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 NFE4Q86UQ8 179 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
CDX2-202ENST00000548877 DAZAP1Q96EP5 407 aaKnown RBP9.23□□□□□ -0.93
CDX2-202ENST00000548877 ZNF331Q9NQX6 463 aaPredicted RBP9.23□□□□□ -0.93
CDX2-202ENST00000548877 TGIF2-C20orf24A0A0A6YYL0 155 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 TRAV34A0A0B4J273 112 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 GATCO43716 136 aaKnown RBP9.22□□□□□ -0.93
CDX2-202ENST00000548877 SMR3BP02814 79 aaPredicted RBP9.22□□□□□ -0.93
CDX2-202ENST00000548877 CT83Q5H943 113 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 SAPCD1Q5SSQ6 148 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 Q6ZSN1 163 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 LINC00479Q96M42 142 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
CDX2-202ENST00000548877 GAGE12BA1L429 117 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 RBAKDNA6NC62 111 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 J3QL48 77 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 SLC17A3O00476 420 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 GAGE7O76087 117 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 CXCL1P09341 107 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 GAGE12FP0CL80 117 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 GAGE12GP0CL81 117 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 GAGE12IP0CL82 117 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 CT45A10P0DMU9 189 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 DAZ2Q13117 558 aaKnown RBP9.21□□□□□ -0.94
CDX2-202ENST00000548877 NDFIP1Q9BT67 221 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 PSG8Q9UQ74 426 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 V9GYV3 84 aa9.21□□□□□ -0.94
CDX2-202ENST00000548877 DNAH8Q96JB1 4490 aa9.2□□□□□ -0.94
CDX2-202ENST00000548877 S100A6P06703 90 aa9.2□□□□□ -0.94
CDX2-202ENST00000548877 GCSHP23434 173 aa9.2□□□□□ -0.94
CDX2-202ENST00000548877 PRNTQ86SH4 94 aa9.2□□□□□ -0.94
CDX2-202ENST00000548877 TMEM70Q9BUB7 260 aa9.2□□□□□ -0.94
CDX2-202ENST00000548877 TNFRSF18Q9Y5U5 241 aa9.2□□□□□ -0.94
CDX2-202ENST00000548877 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
CDX2-202ENST00000548877 A8MWL6 223 aa9.19□□□□□ -0.94
CDX2-202ENST00000548877 KRTAP29-1A8MX34 341 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms