RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
CHMP1A-205ENST00000548650 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
CHMP1A-205ENST00000548650 IBA57-AS1B1ANH7 110 aa11.66□□□□□ -0.54
CHMP1A-205ENST00000548650 ACTR3CQ9C0K3 210 aaPredicted RBP11.66□□□□□ -0.54
CHMP1A-205ENST00000548650 VPS13BQ7Z7G8 4022 aa11.66□□□□□ -0.54
CHMP1A-205ENST00000548650 TRAV8-6A0A0B4J262 113 aa11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 G3V3Q6 166 aa11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 GCSHP23434 173 aa11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 ZNF726P1Q15940 193 aa11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 OR10J3Q5JRS4 329 aa11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 LELP1Q5T871 98 aa11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 Q5VSD8 79 aa11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.54
CHMP1A-205ENST00000548650 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 IGKV3D-20A0A0C4DH25 116 aa11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 A0A1W2PRE2 83 aa11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 SMLR1H3BR10 107 aa11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 LINC00694P0DN24 101 aa11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 MGST1P10620 155 aaKnown RBP11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 SAPCD1Q5SSQ6 148 aa11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 LINC00479Q96M42 142 aa11.64□□□□□ -0.55
CHMP1A-205ENST00000548650 PSCAO43653 123 aa11.63□□□□□ -0.55
CHMP1A-205ENST00000548650 Q86TA4 180 aa11.63□□□□□ -0.55
CHMP1A-205ENST00000548650 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
CHMP1A-205ENST00000548650 PARLQ9H300 379 aa11.63□□□□□ -0.55
CHMP1A-205ENST00000548650 Q9HAA7 133 aa11.63□□□□□ -0.55
CHMP1A-205ENST00000548650 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
CHMP1A-205ENST00000548650 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
CHMP1A-205ENST00000548650 HERC1Q15751 4861 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 TRAV34A0A0B4J273 112 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 ARPC5O15511 151 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 IGHV3-30P01768 117 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 IGHV3-30-3P0DP02 117 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 IGHV3-30-5P0DP03 117 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 Q6ZSN1 163 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 ATP6V0E2Q8NHE4 81 aa11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
CHMP1A-205ENST00000548650 IGLV5-52A0A0A0MRZ9 124 aa11.61□□□□□ -0.55
CHMP1A-205ENST00000548650 LAGE3Q14657 143 aa11.61□□□□□ -0.55
CHMP1A-205ENST00000548650 PIK3CD-AS1Q5SR53 167 aa11.61□□□□□ -0.55
CHMP1A-205ENST00000548650 ZFP2Q6ZN57 461 aa11.61□□□□□ -0.55
CHMP1A-205ENST00000548650 Q8N3U1 123 aa11.61□□□□□ -0.55
CHMP1A-205ENST00000548650 Q8N814 137 aa11.61□□□□□ -0.55
CHMP1A-205ENST00000548650 FRZBQ92765 325 aa11.61□□□□□ -0.55
CHMP1A-205ENST00000548650 BORCS7-ASMTA0A0B4J1R7 106 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 A8MWV9 139 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 PEX7O00628 323 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 ASIPP42127 132 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 UBE2G2P60604 165 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 HAMPP81172 84 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 UFSP1Q6NVU6 142 aa11.6□□□□□ -0.55
CHMP1A-205ENST00000548650 IFNA7P01567 189 aa11.59□□□□□ -0.55
CHMP1A-205ENST00000548650 S100A4P26447 101 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-205ENST00000548650 TMEM70Q9BUB7 260 aa11.59□□□□□ -0.55
CHMP1A-205ENST00000548650 IL36BQ9NZH7 164 aa11.59□□□□□ -0.55
CHMP1A-205ENST00000548650 FLG2Q5D862 2391 aaPredicted RBP11.59□□□□□ -0.55
CHMP1A-205ENST00000548650 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 FAM74A7A6NL05 159 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 H3BVH4 76 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 GAGE1Q13065 139 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 GAGE4Q13068 117 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 GAGE5Q13069 117 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 LGALSLQ3ZCW2 172 aaPredicted RBP11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 GAGE13Q4V321 117 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 ZC2HC1AQ96GY0 325 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 JPT2Q9H910 190 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 Q9UF83 564 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 MYCBP2O75592 4640 aa11.58□□□□□ -0.56
CHMP1A-205ENST00000548650 B4DEV8 164 aa11.57□□□□□ -0.56
CHMP1A-205ENST00000548650 SMR3BP02814 79 aaPredicted RBP11.57□□□□□ -0.56
CHMP1A-205ENST00000548650 WFDC2Q14508 124 aa11.57□□□□□ -0.56
CHMP1A-205ENST00000548650 HIST1H2BAQ96A08 127 aa11.57□□□□□ -0.56
CHMP1A-205ENST00000548650 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
CHMP1A-205ENST00000548650 DNAH8Q96JB1 4490 aa11.56□□□□□ -0.56
CHMP1A-205ENST00000548650 CRIP1P50238 77 aa11.56□□□□□ -0.56
CHMP1A-205ENST00000548650 DNLZQ5SXM8 178 aa11.56□□□□□ -0.56
CHMP1A-205ENST00000548650 COX8CQ7Z4L0 72 aa11.56□□□□□ -0.56
CHMP1A-205ENST00000548650 C14orf178Q8N769 122 aaPredicted RBP11.56□□□□□ -0.56
CHMP1A-205ENST00000548650 CYTL1Q9NRR1 136 aa11.56□□□□□ -0.56
CHMP1A-205ENST00000548650 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 KRBOX1C9JBD0 128 aa11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 SH2D1AO60880 128 aa11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 AKR1C8PQ5T2L2 129 aa11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 OR11H4Q8NGC9 324 aa11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 NKX6-2Q9C056 277 aaPredicted RBP11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 SRRM2Q9UQ35 2752 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-205ENST00000548650 M0R036 132 aa11.54□□□□□ -0.56
CHMP1A-205ENST00000548650 RHODO00212 210 aa11.54□□□□□ -0.56
CHMP1A-205ENST00000548650 ARMS2P0C7Q2 107 aa11.54□□□□□ -0.56
CHMP1A-205ENST00000548650 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
CHMP1A-205ENST00000548650 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
CHMP1A-205ENST00000548650 KCNRGQ8N5I3 272 aa11.53□□□□□ -0.56
CHMP1A-205ENST00000548650 SYT8Q8NBV8 401 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms