RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TMEM167AQ8TBQ9 72 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 SEC22CQ9BRL7 303 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 GINS3Q9BRX5 216 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 CCDC90BQ9GZT6 254 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 COL7A1Q02388 2944 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 TRBV6-7A0A0A0MS04 114 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 TRAV14DV4A0A0A6YYC5 116 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 TMEM189A5PLL7 270 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 TMEM14DPA8MWL7 114 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 J3QRK9 145 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 PDCD5O14737 125 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 DENRO43583 198 aaKnown RBP2.03□□□□□ -2.08
PTCH1-216ENST00000548379 REG1AP05451 166 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 SPART-AS1P0CW21 52 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 RANP62826 216 aaKnown RBP2.03□□□□□ -2.08
PTCH1-216ENST00000548379 CATR1Q13166 79 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 OR2F1Q13607 317 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 C10orf55Q5SWW7 151 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 PYDC1Q8WXC3 89 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 BORCS5Q969J3 196 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 ARHGAP5-AS1Q96IT6 56 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 RHPN1-AS1Q9BWJ2 59 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 PECRQ9BY49 303 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 LPAR5Q9H1C0 372 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 TMEM14BQ9NUH8 114 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 SMPXQ9UHP9 88 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 RABAC1Q9UI14 185 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 DOCK11Q5JSL3 2073 aa2.03□□□□□ -2.08
PTCH1-216ENST00000548379 STAB2Q8WWQ8 2551 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 TRAV2A0A0B4J234 112 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 A0A1B0GW64 132 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 GNG7O60262 68 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 SNAPC5O75971 98 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 KRASP01116 189 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 LTAP01374 205 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 TRAPPC2P0DI81 140 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 TRAPPC2BP0DI82 140 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 OR13C7P0DN81 318 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 HIST1H1DP16402 221 aaKnown RBP2.02□□□□□ -2.09
PTCH1-216ENST00000548379 S100GP29377 79 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 PSMB3P49720 205 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 SULT1A1P50225 295 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 DEFB131AP59861 70 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 LAIR2Q6ISS4 152 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 SFXN4Q6P4A7 337 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 TCF24Q7RTU0 167 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 NIT1Q86X76 327 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 GDPD1Q8N9F7 314 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF680Q8NEM1 530 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 OR51H1Q8NH63 302 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 MAFIPQ8WZ33 124 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 LSM10Q969L4 123 aaKnown RBP2.02□□□□□ -2.09
PTCH1-216ENST00000548379 MND1Q9BWT6 205 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 GNB1LQ9BYB4 327 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 ATG5Q9H1Y0 275 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.02□□□□□ -2.09
PTCH1-216ENST00000548379 FKBP11Q9NYL4 201 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 BET1LQ9NYM9 111 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 TAS2R8Q9NYW2 309 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 LSM5Q9Y4Y9 91 aaKnown RBP2.02□□□□□ -2.09
PTCH1-216ENST00000548379 LYSTQ99698 3801 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 HERC2O95714 4834 aa2.02□□□□□ -2.09
PTCH1-216ENST00000548379 SACSQ9NZJ4 4579 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 HUWE1Q7Z6Z7 4374 aaKnown RBP2.01□□□□□ -2.09
PTCH1-216ENST00000548379 WNK2Q9Y3S1 2297 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 TGIF2-C20orf24A0A0A6YYL0 155 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 IGHV3-21A0A0B4J1V1 117 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 SMIM9A6NGZ8 99 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 E7EUB6 86 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 S1PR2O95136 353 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 UCHL1P09936 223 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 HTN3P15516 51 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 NFYAP23511 347 aaPredicted RBP2.01□□□□□ -2.09
PTCH1-216ENST00000548379 NPPCP23582 126 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 DDTP30046 118 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 EMP1P54849 157 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 CCL18P55774 89 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 GNG2P59768 71 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 RAB5BP61020 215 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 SNRPD3P62318 126 aaKnown RBP2.01□□□□□ -2.09
PTCH1-216ENST00000548379 QRFPP83859 136 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 ERHP84090 104 aaKnown RBP2.01□□□□□ -2.09
PTCH1-216ENST00000548379 INSL4Q14641 139 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 MSMO1Q15800 293 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 KLK9Q2XQG4 91 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 AADACL3Q5VUY0 350 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 Q6ZS49 121 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF767PQ75MW2 155 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 SLC51BQ86UW2 128 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 C8orf59Q8N0T1 100 aaPredicted RBP2.01□□□□□ -2.09
PTCH1-216ENST00000548379 TMEM75Q8N9X5 138 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 C15orf53Q8NAA6 179 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 Q8NAQ8 132 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 BPIFB6Q8NFQ5 453 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 OR1L8Q8NGR8 309 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 TMEM203Q969S6 136 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 DGCR14Q96DF8 476 aaKnown RBP2.01□□□□□ -2.09
PTCH1-216ENST00000548379 ACY3Q96HD9 319 aa2.01□□□□□ -2.09
PTCH1-216ENST00000548379 TSC22D3Q99576 134 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms