RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
HDAC7-227ENST00000548080 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
HDAC7-227ENST00000548080 S100A4P26447 101 aaKnown RBP12.6□□□□□ -0.39
HDAC7-227ENST00000548080 RBMY1FQ15415 496 aaKnown RBP12.6□□□□□ -0.39
HDAC7-227ENST00000548080 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-227ENST00000548080 Q6ZWC4 215 aa12.6□□□□□ -0.39
HDAC7-227ENST00000548080 RNF183Q96D59 192 aa12.6□□□□□ -0.39
HDAC7-227ENST00000548080 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-227ENST00000548080 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
HDAC7-227ENST00000548080 TRAPPC1Q9Y5R8 145 aa12.6□□□□□ -0.39
HDAC7-227ENST00000548080 SNAI2O43623 268 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 OR5AL1P0C617 328 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 CAMPP49913 170 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 TMEM136Q6ZRR5 245 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 SNURFLB1AK76 121 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 MT-ND6P03923 174 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 RAB4BP61018 213 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
HDAC7-227ENST00000548080 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
HDAC7-227ENST00000548080 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
HDAC7-227ENST00000548080 H3BVH4 76 aa12.58□□□□□ -0.4
HDAC7-227ENST00000548080 HLA-DQA1P01909 254 aa12.58□□□□□ -0.4
HDAC7-227ENST00000548080 S100A8P05109 93 aa12.58□□□□□ -0.4
HDAC7-227ENST00000548080 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
HDAC7-227ENST00000548080 C1QTNF4Q9BXJ3 329 aa12.58□□□□□ -0.4
HDAC7-227ENST00000548080 TRGV11A0A075B6L2 103 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 RAB5BP61020 215 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 SSTP61278 116 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 CACNG7P62955 275 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 FABP9Q0Z7S8 132 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 FRZBQ92765 325 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 WWC2-AS2Q96NR7 200 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 LINC01587Q99440 93 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 MRPL18Q9H0U6 180 aaKnown RBP12.57□□□□□ -0.4
HDAC7-227ENST00000548080 TP53TG3Q9ULZ0 132 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-227ENST00000548080 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
HDAC7-227ENST00000548080 IGHV3-16A0A0C4DH30 117 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 CBY3A6NI87 242 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 PHOX2AO14813 284 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
HDAC7-227ENST00000548080 NTF3P20783 257 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 C1orf158Q8N1D5 194 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 OR11H2Q8NH07 326 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 SCRT2Q9NQ03 307 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 TP53TG1Q9Y2A0 90 aa12.56□□□□□ -0.4
HDAC7-227ENST00000548080 IGHV4-4A0A075B6R2 117 aa12.55□□□□□ -0.4
HDAC7-227ENST00000548080 TWIST1Q15672 202 aa12.55□□□□□ -0.4
HDAC7-227ENST00000548080 GATD1Q8NB37 220 aa12.55□□□□□ -0.4
HDAC7-227ENST00000548080 OR10AG1Q8NH19 301 aa12.55□□□□□ -0.4
HDAC7-227ENST00000548080 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
HDAC7-227ENST00000548080 PHLDA3Q9Y5J5 127 aa12.55□□□□□ -0.4
HDAC7-227ENST00000548080 A0A0J9YWU9 116 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 DEFB4AO15263 64 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 HTN1P15515 57 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 SPANXN1Q5VSR9 72 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 ZFP82Q8N141 532 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 CSNK1G2-AS1Q8NCQ2 148 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 TMEM208Q9BTX3 173 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 GOLT1BQ9Y3E0 138 aa12.54□□□□□ -0.4
HDAC7-227ENST00000548080 IGHV3OR16-12A0A075B7B8 117 aa12.53□□□□□ -0.4
HDAC7-227ENST00000548080 APCSP02743 223 aa12.53□□□□□ -0.4
HDAC7-227ENST00000548080 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
HDAC7-227ENST00000548080 MSRB1Q9NZV6 116 aa12.53□□□□□ -0.4
HDAC7-227ENST00000548080 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
HDAC7-227ENST00000548080 ZNF493Q6ZR52 646 aa12.53□□□□□ -0.4
HDAC7-227ENST00000548080 TRGC1P0CF51 173 aa12.52□□□□□ -0.41
HDAC7-227ENST00000548080 SLAQ13239 276 aa12.52□□□□□ -0.41
HDAC7-227ENST00000548080 M0R381 172 aa12.51□□□□□ -0.41
HDAC7-227ENST00000548080 TMEM191AQ9H0A3 160 aa12.51□□□□□ -0.41
HDAC7-227ENST00000548080 X6R8D5 127 aa12.51□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BKO60814 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 NXPH4O95158 308 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 PRM2P04554 102 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BJP06899 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BOP23527 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BBP33778 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BDP58876 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BCP62807 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 ZNF415Q09FC8 603 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST2H2BEQ16778 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BHQ93079 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BNQ99877 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 HIST1H2BMQ99879 126 aa12.5□□□□□ -0.41
HDAC7-227ENST00000548080 IGHV4-28A0A0C4DH34 117 aa12.49□□□□□ -0.41
HDAC7-227ENST00000548080 KIAA1644Q3SXP7 199 aa12.49□□□□□ -0.41
HDAC7-227ENST00000548080 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
HDAC7-227ENST00000548080 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
HDAC7-227ENST00000548080 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
HDAC7-227ENST00000548080 FAM104BQ5XKR9 115 aa12.48□□□□□ -0.41
HDAC7-227ENST00000548080 ZNF705AQ6ZN79 300 aaPredicted RBP12.48□□□□□ -0.41
HDAC7-227ENST00000548080 Q8NAQ8 132 aa12.48□□□□□ -0.41
HDAC7-227ENST00000548080 SYT8Q8NBV8 401 aa12.48□□□□□ -0.41
HDAC7-227ENST00000548080 MUC7Q8TAX7 377 aa12.48□□□□□ -0.41
HDAC7-227ENST00000548080 MUC4Q99102 2169 aa12.48□□□□□ -0.41
HDAC7-227ENST00000548080 AZU1P20160 251 aa12.47□□□□□ -0.41
HDAC7-227ENST00000548080 C11orf72Q8NBR9 251 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms