RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 LINC01556Q5JQF7 62 aa8.96□□□□□ -0.98
CPSF6-204ENST00000547486 SAPCD1Q5SSQ6 148 aa8.96□□□□□ -0.98
CPSF6-204ENST00000547486 INO80EQ8NBZ0 244 aaPredicted RBP8.96□□□□□ -0.98
CPSF6-204ENST00000547486 FXYD6-FXYD2A0A087WZ82 144 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 G3V3Q6 166 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 CIDEAO60543 219 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 FGF8P55075 233 aaPredicted RBP8.95□□□□□ -0.98
CPSF6-204ENST00000547486 UBE2G2P60604 165 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 ZFP69Q49AA0 526 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 C10orf126Q8N4M7 172 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 PRADC1Q9BSG0 188 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 Q9UF83 564 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 ARL2-SNX15V9GYD0 113 aa8.95□□□□□ -0.98
CPSF6-204ENST00000547486 BORCS7-ASMTA0A0B4J1R7 106 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 IBA57-AS1B1ANH7 110 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 IFNA7P01567 189 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 CRIP1P50238 77 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 RHOHQ15669 191 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 OR10J3Q5JRS4 329 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 OR2T35Q8NGX2 323 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 JPT2Q9H910 190 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 FAT1Q14517 4588 aa8.94□□□□□ -0.98
CPSF6-204ENST00000547486 TRAV8-6A0A0B4J262 113 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 CTXND1A0A1B0GTU2 59 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 FAM74A7A6NL05 159 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 FABP5P3A8MUU1 101 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 IGHV3-30P01768 117 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 IGHV3-33P01772 117 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 IGHV3-30-3P0DP02 117 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 IGHV3-30-5P0DP03 117 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 MGST1P10620 155 aaKnown RBP8.93□□□□□ -0.98
CPSF6-204ENST00000547486 LELP1Q5T871 98 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 ATP6V0E2Q8NHE4 81 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 SAMD10Q9BYL1 202 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 GTSF1LQ9H1H1 148 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 PARLQ9H300 379 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 CYTL1Q9NRR1 136 aa8.93□□□□□ -0.98
CPSF6-204ENST00000547486 EPM2AB3EWF7 344 aa8.92□□□□□ -0.98
CPSF6-204ENST00000547486 PEX7O00628 323 aa8.92□□□□□ -0.98
CPSF6-204ENST00000547486 GCSHP23434 173 aa8.92□□□□□ -0.98
CPSF6-204ENST00000547486 UFSP1Q6NVU6 142 aa8.92□□□□□ -0.98
CPSF6-204ENST00000547486 Q8N3U1 123 aa8.92□□□□□ -0.98
CPSF6-204ENST00000547486 ZC2HC1AQ96GY0 325 aa8.92□□□□□ -0.98
CPSF6-204ENST00000547486 GAGE12JA6NER3 117 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 PSCAO43653 123 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
CPSF6-204ENST00000547486 GAGE1Q13065 139 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 GAGE4Q13068 117 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 GAGE5Q13069 117 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 LGALSLQ3ZCW2 172 aaPredicted RBP8.91□□□□□ -0.98
CPSF6-204ENST00000547486 GAGE13Q4V321 117 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 ZFP2Q6ZN57 461 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 Q86TA4 180 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 Q9HAA7 133 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 IL36BQ9NZH7 164 aa8.91□□□□□ -0.98
CPSF6-204ENST00000547486 GRIFINA4D1Z8 144 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 A8MWV9 139 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 KRBOX1C9JBD0 128 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 ASIPP42127 132 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 PIK3CD-AS1Q5SR53 167 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 AKR1C8PQ5T2L2 129 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 COX8CQ7Z4L0 72 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 C14orf178Q8N769 122 aaPredicted RBP8.9□□□□□ -0.98
CPSF6-204ENST00000547486 HIST1H2BAQ96A08 127 aa8.9□□□□□ -0.98
CPSF6-204ENST00000547486 B4DEV8 164 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 SMLR1H3BR10 107 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 H3BVH4 76 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 M0R036 132 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 ARPC5O15511 151 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 SH2D1AO60880 128 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 SMR3BP02814 79 aaPredicted RBP8.89□□□□□ -0.99
CPSF6-204ENST00000547486 ARMS2P0C7Q2 107 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 FHITP49789 147 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 HAMPP81172 84 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 NKX6-2Q9C056 277 aaPredicted RBP8.89□□□□□ -0.99
CPSF6-204ENST00000547486 HERC1Q15751 4861 aa8.89□□□□□ -0.99
CPSF6-204ENST00000547486 IGLV5-52A0A0A0MRZ9 124 aa8.88□□□□□ -0.99
CPSF6-204ENST00000547486 MAP1LC3B2A6NCE7 125 aa8.88□□□□□ -0.99
CPSF6-204ENST00000547486 WFDC2Q14508 124 aa8.88□□□□□ -0.99
CPSF6-204ENST00000547486 DNLZQ5SXM8 178 aa8.88□□□□□ -0.99
CPSF6-204ENST00000547486 Q8N814 137 aa8.88□□□□□ -0.99
CPSF6-204ENST00000547486 MAP1LC3BQ9GZQ8 125 aa8.88□□□□□ -0.99
CPSF6-204ENST00000547486 ZFP30Q9Y2G7 519 aa8.88□□□□□ -0.99
CPSF6-204ENST00000547486 INAFM2P0DMQ5 153 aa8.87□□□□□ -0.99
CPSF6-204ENST00000547486 ZNF674Q2M3X9 581 aa8.87□□□□□ -0.99
CPSF6-204ENST00000547486 FAM162BQ5T6X4 162 aa8.87□□□□□ -0.99
CPSF6-204ENST00000547486 Q5VSD8 79 aa8.87□□□□□ -0.99
CPSF6-204ENST00000547486 DAZ4Q86SG3 579 aaKnown RBP8.87□□□□□ -0.99
CPSF6-204ENST00000547486 DAZ3Q9NR90 486 aaKnown RBP8.87□□□□□ -0.99
CPSF6-204ENST00000547486 BOLA1Q9Y3E2 137 aa8.87□□□□□ -0.99
CPSF6-204ENST00000547486 TMSB15BA0A087X1C1 80 aa8.86□□□□□ -0.99
CPSF6-204ENST00000547486 LTAP01374 205 aa8.86□□□□□ -0.99
CPSF6-204ENST00000547486 RGS21Q2M5E4 152 aa8.86□□□□□ -0.99
CPSF6-204ENST00000547486 CST9LP1Q5W188 147 aa8.86□□□□□ -0.99
CPSF6-204ENST00000547486 NTN5Q8WTR8 489 aaPredicted RBP8.86□□□□□ -0.99
CPSF6-204ENST00000547486 SFRP2Q96HF1 295 aa8.86□□□□□ -0.99
CPSF6-204ENST00000547486 FMC1Q96HJ9 113 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms