RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 LELP1Q5T871 98 aa12.59□□□□□ -0.39
CHPT1-202ENST00000546490 INO80EQ8NBZ0 244 aaPredicted RBP12.59□□□□□ -0.39
CHPT1-202ENST00000546490 FRZBQ92765 325 aa12.59□□□□□ -0.39
CHPT1-202ENST00000546490 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
CHPT1-202ENST00000546490 PGPEP1LA6NFU8 196 aa12.58□□□□□ -0.4
CHPT1-202ENST00000546490 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
CHPT1-202ENST00000546490 GIPP09681 153 aaPredicted RBP12.58□□□□□ -0.4
CHPT1-202ENST00000546490 RNASE3P12724 160 aaKnown RBP12.58□□□□□ -0.4
CHPT1-202ENST00000546490 Q9HAA7 133 aa12.58□□□□□ -0.4
CHPT1-202ENST00000546490 IGLV5-52A0A0A0MRZ9 124 aa12.57□□□□□ -0.4
CHPT1-202ENST00000546490 BORCS7-ASMTA0A0B4J1R7 106 aa12.57□□□□□ -0.4
CHPT1-202ENST00000546490 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
CHPT1-202ENST00000546490 Q5VSD8 79 aa12.57□□□□□ -0.4
CHPT1-202ENST00000546490 ATP6V0E2Q8NHE4 81 aa12.57□□□□□ -0.4
CHPT1-202ENST00000546490 NTN5Q8WTR8 489 aaPredicted RBP12.57□□□□□ -0.4
CHPT1-202ENST00000546490 GTSF1LQ9H1H1 148 aa12.57□□□□□ -0.4
CHPT1-202ENST00000546490 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 A8MWV9 139 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 IGHV3-30P01768 117 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 IGHV3-33P01772 117 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 IGHV3-30-3P0DP02 117 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 IGHV3-30-5P0DP03 117 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 RPL7L1Q6DKI1 246 aaKnown RBP12.56□□□□□ -0.4
CHPT1-202ENST00000546490 ARL2-SNX15V9GYD0 113 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 VPS13BQ7Z7G8 4022 aa12.56□□□□□ -0.4
CHPT1-202ENST00000546490 FXYD6-FXYD2A0A087WZ82 144 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 LRCOL1A6NCL2 159 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 RNF222A6NCQ9 220 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 IFNA7P01567 189 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 ASIPP42127 132 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 LAGE3Q14657 143 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 Q5BKY6 102 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 PIK3CD-AS1Q5SR53 167 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 ZFP2Q6ZN57 461 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 Q86TA4 180 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 PARLQ9H300 379 aa12.55□□□□□ -0.4
CHPT1-202ENST00000546490 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
CHPT1-202ENST00000546490 PEX7O00628 323 aa12.54□□□□□ -0.4
CHPT1-202ENST00000546490 INAFM2P0DMQ5 153 aa12.54□□□□□ -0.4
CHPT1-202ENST00000546490 UBE2G2P60604 165 aa12.54□□□□□ -0.4
CHPT1-202ENST00000546490 LINC00479Q96M42 142 aa12.54□□□□□ -0.4
CHPT1-202ENST00000546490 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
CHPT1-202ENST00000546490 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
CHPT1-202ENST00000546490 ZNF726P1Q15940 193 aa12.53□□□□□ -0.4
CHPT1-202ENST00000546490 LGALSLQ3ZCW2 172 aaPredicted RBP12.53□□□□□ -0.4
CHPT1-202ENST00000546490 Q8N814 137 aa12.53□□□□□ -0.4
CHPT1-202ENST00000546490 TMEM70Q9BUB7 260 aa12.53□□□□□ -0.4
CHPT1-202ENST00000546490 NKX6-2Q9C056 277 aaPredicted RBP12.53□□□□□ -0.4
CHPT1-202ENST00000546490 HERC1Q15751 4861 aa12.52□□□□□ -0.4
CHPT1-202ENST00000546490 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
CHPT1-202ENST00000546490 HIST1H2BAQ96A08 127 aa12.52□□□□□ -0.41
CHPT1-202ENST00000546490 IL36BQ9NZH7 164 aa12.52□□□□□ -0.41
CHPT1-202ENST00000546490 GAGE12JA6NER3 117 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 B4DEV8 164 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 H3BVH4 76 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 LINC00694P0DN24 101 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 GAGE1Q13065 139 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 GAGE4Q13068 117 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 GAGE5Q13069 117 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 GAGE13Q4V321 117 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 OR2T35Q8NGX2 323 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 TM2D2Q9BX73 214 aa12.51□□□□□ -0.41
CHPT1-202ENST00000546490 FAM74A7A6NL05 159 aa12.5□□□□□ -0.41
CHPT1-202ENST00000546490 RHODO00212 210 aa12.5□□□□□ -0.41
CHPT1-202ENST00000546490 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
CHPT1-202ENST00000546490 Q6ZSN1 163 aa12.5□□□□□ -0.41
CHPT1-202ENST00000546490 SYT8Q8NBV8 401 aa12.5□□□□□ -0.41
CHPT1-202ENST00000546490 DMBT1Q9UGM3 2413 aaPredicted RBP12.49□□□□□ -0.41
CHPT1-202ENST00000546490 A0A087WWC5 75 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 MAP1LC3B2A6NCE7 125 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 M0R036 132 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 SMR3BP02814 79 aaPredicted RBP12.48□□□□□ -0.41
CHPT1-202ENST00000546490 UBE2G1P62253 170 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 HAMPP81172 84 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 TOR2AQ5JU69 321 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 DNLZQ5SXM8 178 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 OR11H4Q8NGC9 324 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 ZC2HC1AQ96GY0 325 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 FMC1Q96HJ9 113 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 MAP1LC3BQ9GZQ8 125 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 JPT2Q9H910 190 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 ZFP30Q9Y2G7 519 aa12.48□□□□□ -0.41
CHPT1-202ENST00000546490 MYCBP2O75592 4640 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 TRAV8-3A0A0A6YYJ7 113 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 KRBOX1C9JBD0 128 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 FAM229AH3BQW9 127 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 FAM162BQ5T6X4 162 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 Q8N3U1 123 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 SAMD10Q9BYL1 202 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 SRRM2Q9UQ35 2752 aaKnown RBP12.47□□□□□ -0.41
CHPT1-202ENST00000546490 DNAH8Q96JB1 4490 aa12.47□□□□□ -0.41
CHPT1-202ENST00000546490 SH2D1AO60880 128 aa12.46□□□□□ -0.41
CHPT1-202ENST00000546490 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.41
CHPT1-202ENST00000546490 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.41
CHPT1-202ENST00000546490 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
CHPT1-202ENST00000546490 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.41
CHPT1-202ENST00000546490 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.41
CHPT1-202ENST00000546490 TCEAL7Q9BRU2 100 aa12.46□□□□□ -0.41
CHPT1-202ENST00000546490 ARPC5O15511 151 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms