RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 IGHV3-73A0A0B4J1V6 119 aa15.37■□□□□ 0.05
CHD4-214ENST00000545942 TRAV34A0A0B4J273 112 aa15.37■□□□□ 0.05
CHD4-214ENST00000545942 IGHV3-38A0A0C4DH36 116 aa15.37■□□□□ 0.05
CHD4-214ENST00000545942 PGPEP1LA6NFU8 196 aa15.37■□□□□ 0.05
CHD4-214ENST00000545942 AKR1C8PQ5T2L2 129 aa15.37■□□□□ 0.05
CHD4-214ENST00000545942 UBE2G2P60604 165 aa15.36■□□□□ 0.05
CHD4-214ENST00000545942 NKX6-2Q9C056 277 aaPredicted RBP15.36■□□□□ 0.05
CHD4-214ENST00000545942 PEX7O00628 323 aa15.35■□□□□ 0.05
CHD4-214ENST00000545942 MGST1P10620 155 aaKnown RBP15.35■□□□□ 0.05
CHD4-214ENST00000545942 SCRT2Q9NQ03 307 aa15.35■□□□□ 0.05
CHD4-214ENST00000545942 BOLA1Q9Y3E2 137 aa15.35■□□□□ 0.05
CHD4-214ENST00000545942 TRAV8-6A0A0B4J262 113 aa15.34■□□□□ 0.05
CHD4-214ENST00000545942 IGKV3D-20A0A0C4DH25 116 aa15.34■□□□□ 0.05
CHD4-214ENST00000545942 FAM74A7A6NL05 159 aa15.34■□□□□ 0.05
CHD4-214ENST00000545942 FABP5P3A8MUU1 101 aa15.34■□□□□ 0.05
CHD4-214ENST00000545942 G3V3Q6 166 aa15.34■□□□□ 0.05
CHD4-214ENST00000545942 S100A4P26447 101 aaKnown RBP15.34■□□□□ 0.05
CHD4-214ENST00000545942 FUSP35637 526 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHD4-214ENST00000545942 FGF8P55075 233 aaPredicted RBP15.34■□□□□ 0.05
CHD4-214ENST00000545942 LINC01556Q5JQF7 62 aa15.34■□□□□ 0.05
CHD4-214ENST00000545942 HIST1H2BAQ96A08 127 aa15.34■□□□□ 0.05
CHD4-214ENST00000545942 RGS21Q2M5E4 152 aa15.33■□□□□ 0.04
CHD4-214ENST00000545942 Q86TA4 180 aa15.33■□□□□ 0.04
CHD4-214ENST00000545942 ARPC5O15511 151 aa15.32■□□□□ 0.04
CHD4-214ENST00000545942 ASIPP42127 132 aa15.32■□□□□ 0.04
CHD4-214ENST00000545942 OR10J3Q5JRS4 329 aa15.32■□□□□ 0.04
CHD4-214ENST00000545942 PIK3CD-AS1Q5SR53 167 aa15.32■□□□□ 0.04
CHD4-214ENST00000545942 A8MWV9 139 aa15.31■□□□□ 0.04
CHD4-214ENST00000545942 LELP1Q5T871 98 aa15.31■□□□□ 0.04
CHD4-214ENST00000545942 CYTL1Q9NRR1 136 aa15.31■□□□□ 0.04
CHD4-214ENST00000545942 MAP1LC3B2A6NCE7 125 aa15.3■□□□□ 0.04
CHD4-214ENST00000545942 ZFP2Q6ZN57 461 aa15.3■□□□□ 0.04
CHD4-214ENST00000545942 ATP6V0E2Q8NHE4 81 aa15.3■□□□□ 0.04
CHD4-214ENST00000545942 MAP1LC3BQ9GZQ8 125 aa15.3■□□□□ 0.04
CHD4-214ENST00000545942 GTSF1LQ9H1H1 148 aa15.3■□□□□ 0.04
CHD4-214ENST00000545942 PARLQ9H300 379 aa15.3■□□□□ 0.04
CHD4-214ENST00000545942 IL36BQ9NZH7 164 aa15.3■□□□□ 0.04
CHD4-214ENST00000545942 B4DEV8 164 aa15.29■□□□□ 0.04
CHD4-214ENST00000545942 LGALSLQ3ZCW2 172 aaPredicted RBP15.29■□□□□ 0.04
CHD4-214ENST00000545942 ZFP30Q9Y2G7 519 aa15.29■□□□□ 0.04
CHD4-214ENST00000545942 IBA57-AS1B1ANH7 110 aa15.28■□□□□ 0.04
CHD4-214ENST00000545942 PSCAO43653 123 aa15.28■□□□□ 0.04
CHD4-214ENST00000545942 Q6ZSN1 163 aa15.27■□□□□ 0.04
CHD4-214ENST00000545942 COX8CQ7Z4L0 72 aa15.27■□□□□ 0.04
CHD4-214ENST00000545942 STOML3Q8TAV4 291 aa15.27■□□□□ 0.04
CHD4-214ENST00000545942 ZC2HC1AQ96GY0 325 aa15.27■□□□□ 0.04
CHD4-214ENST00000545942 FMC1Q96HJ9 113 aa15.27■□□□□ 0.04
CHD4-214ENST00000545942 TCEAL7Q9BRU2 100 aa15.27■□□□□ 0.04
CHD4-214ENST00000545942 H3BVH4 76 aa15.26■□□□□ 0.03
CHD4-214ENST00000545942 CRIP1P50238 77 aa15.26■□□□□ 0.03
CHD4-214ENST00000545942 UBE2G1P62253 170 aa15.26■□□□□ 0.03
CHD4-214ENST00000545942 KRBOX1C9JBD0 128 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 M0R036 132 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 SH2D1AO60880 128 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 IGHV3-30P01768 117 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 IGHV3-33P01772 117 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 IGHV3-30-3P0DP02 117 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 IGHV3-30-5P0DP03 117 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 FHITP49789 147 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 DNLZQ5SXM8 178 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 FAM162BQ5T6X4 162 aa15.25■□□□□ 0.03
CHD4-214ENST00000545942 KRTAP10-1P60331 282 aa15.24■□□□□ 0.03
CHD4-214ENST00000545942 CST9LP1Q5W188 147 aa15.24■□□□□ 0.03
CHD4-214ENST00000545942 UFSP1Q6NVU6 142 aa15.24■□□□□ 0.03
CHD4-214ENST00000545942 SYT8Q8NBV8 401 aa15.24■□□□□ 0.03
CHD4-214ENST00000545942 JPT2Q9H910 190 aa15.24■□□□□ 0.03
CHD4-214ENST00000545942 Q9HAA7 133 aa15.24■□□□□ 0.03
CHD4-214ENST00000545942 TRBV6-1A0A0K0K1D8 114 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 GAGE12JA6NER3 117 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 SMLR1H3BR10 107 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 ARMS2P0C7Q2 107 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 LINC00694P0DN24 101 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 GAGE1Q13065 139 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 GAGE4Q13068 117 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 GAGE5Q13069 117 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 GAGE13Q4V321 117 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 DMRTA1Q5VZB9 504 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 SAMD10Q9BYL1 202 aa15.23■□□□□ 0.03
CHD4-214ENST00000545942 LRCOL1A6NCL2 159 aa15.22■□□□□ 0.03
CHD4-214ENST00000545942 RHODO00212 210 aa15.22■□□□□ 0.03
CHD4-214ENST00000545942 LTAP01374 205 aa15.22■□□□□ 0.03
CHD4-214ENST00000545942 XGP55808 180 aa15.22■□□□□ 0.03
CHD4-214ENST00000545942 ZNF345Q14585 488 aa15.22■□□□□ 0.03
CHD4-214ENST00000545942 KCNRGQ8N5I3 272 aa15.22■□□□□ 0.03
CHD4-214ENST00000545942 OR11H4Q8NGC9 324 aa15.22■□□□□ 0.03
CHD4-214ENST00000545942 GRIFINA4D1Z8 144 aa15.21■□□□□ 0.03
CHD4-214ENST00000545942 GCSHP23434 173 aa15.21■□□□□ 0.03
CHD4-214ENST00000545942 LAGE3Q14657 143 aa15.21■□□□□ 0.03
CHD4-214ENST00000545942 ZNF674Q2M3X9 581 aa15.21■□□□□ 0.03
CHD4-214ENST00000545942 EPM2AB3EWF7 344 aa15.2■□□□□ 0.02
CHD4-214ENST00000545942 LINC01559Q495D7 138 aa15.2■□□□□ 0.02
CHD4-214ENST00000545942 C14orf178Q8N769 122 aaPredicted RBP15.2■□□□□ 0.02
CHD4-214ENST00000545942 PHLDA3Q9Y5J5 127 aa15.2■□□□□ 0.02
CHD4-214ENST00000545942 PAGE4O60829 102 aa15.19■□□□□ 0.02
CHD4-214ENST00000545942 SEC11BP0C7V7 166 aa15.19■□□□□ 0.02
CHD4-214ENST00000545942 AKR1C3P42330 323 aa15.19■□□□□ 0.02
CHD4-214ENST00000545942 NTN5Q8WTR8 489 aaPredicted RBP15.19■□□□□ 0.02
CHD4-214ENST00000545942 Q9UF83 564 aa15.19■□□□□ 0.02
CHD4-214ENST00000545942 A0A087WWC5 75 aa15.18■□□□□ 0.02
CHD4-214ENST00000545942 IGLV5-52A0A0A0MRZ9 124 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms