RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 RAB4AP20338 218 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 PMCHP20382 165 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 AMTP48728 403 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 SPINK13Q1W4C9 94 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 NSUN5P1Q3KNT7 163 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 MRPL51Q4U2R6 128 aaKnown RBP4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 RNASEKQ6P5S7 137 aaKnown RBP4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 FAM159AQ6UWV7 190 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 OR10AG1Q8NH19 301 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 RNF185Q96GF1 192 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 PRELID3AQ96N28 172 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 AP1S3Q96PC3 154 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 C20orf144Q9BQM9 153 aa4.04□□□□□ -1.76
NPIPB3-214ENST00000545358 MYO9AB2RTY4 2548 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 CUBNO60494 3623 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 IGHV1OR15-1A0A075B7D0 117 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 TRAV12-3A0A0B4J271 114 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 MUC21A0A0G2JKD1 596 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 MUC21A0A140T8X8 626 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 KNCNA6PVL3 124 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 OR11H12B2RN74 326 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 M0R2Z0 102 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 SAP30O75446 220 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 IGLV1-51P01701 117 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 CKS2P33552 79 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 S100A12P80511 92 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 ODF3L2Q3SX64 289 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 MUC21Q5SSG8 566 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 HIST2H2BDQ6DRA6 164 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 Q6ZQT7 251 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 FA2HQ7L5A8 372 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 LINC00482Q8N8I6 264 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 MRAP2Q96G30 205 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 C9orf85Q96MD7 179 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 LINC00467Q9BRT7 94 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 DPH3P1Q9H4G8 78 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 NIT2Q9NQR4 276 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 PHLDA3Q9Y5J5 127 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 X6R8D5 127 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 ITPR2Q14571 2701 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 MXRA5Q9NR99 2828 aa4.03□□□□□ -1.76
NPIPB3-214ENST00000545358 ACANP16112 2415 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 HECTD1Q9ULT8 2610 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 TRAV12-2A0A075B6T6 113 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 IGHV3-16A0A0C4DH30 117 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 RBMY1BA6NDE4 496 aaKnown RBP4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 RBMY1EA6NEQ0 496 aaKnown RBP4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 M0R381 172 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 CRXO43186 299 aaPredicted RBP4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 INSP01308 110 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 IGKV3-20P01619 116 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 CD7P09564 240 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 RBMY1DP0C7P1 496 aaKnown RBP4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 LINC00614P0C842 121 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 INSL3P51460 131 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 KRTAP10-3P60369 221 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 PRR31Q5SQ13 230 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 Q6ZWC4 215 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 TRPT1Q86TN4 253 aaKnown RBP4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 NIT1Q86X76 327 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 STHQ8IWL8 128 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 DEFB125Q8N687 156 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 SYT8Q8NBV8 401 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 URB1-AS1Q96HZ7 61 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 MAP1LC3AQ9H492 121 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 NXT2Q9NPJ8 142 aaKnown RBP4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 GSN-AS1Q9NRJ2 163 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 MSRB1Q9NZV6 116 aa4.02□□□□□ -1.77
NPIPB3-214ENST00000545358 IGHV1-24A0A0C4DH33 117 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 LINC01546A6NGU7 62 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 PRSS47A8MTI9 375 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 GNRH2O43555 120 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 TNFRSF6BO95407 300 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 NCR2O95944 276 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 PPP1R17O96001 155 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 NPYP01303 97 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 SMIM17P0DL12 118 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 EVI2AP22794 236 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 SSTP61278 116 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 NUTF2P61970 127 aaKnown RBP4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 ZNF415Q09FC8 603 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 BEAN1Q3B7T3 259 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 PIK3CD-AS1Q5SR53 167 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 FAM19A2Q8N3H0 131 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 POM121L12Q8N7R1 296 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 PRSS3P2Q8NHM4 247 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 CITED1Q99966 193 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 HSPB8Q9UJY1 196 aa4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 TIMM8BQ9Y5J9 83 aaPredicted RBP4.01□□□□□ -1.77
NPIPB3-214ENST00000545358 MAP1AP78559 2803 aaPredicted RBP4□□□□□ -1.77
NPIPB3-214ENST00000545358 OTOGQ6ZRI0 2925 aa4□□□□□ -1.77
NPIPB3-214ENST00000545358 CBY3A6NI87 242 aa4□□□□□ -1.77
NPIPB3-214ENST00000545358 SMKR1H3BMG3 65 aa4□□□□□ -1.77
NPIPB3-214ENST00000545358 LEPROTL1O95214 131 aa4□□□□□ -1.77
NPIPB3-214ENST00000545358 SCGB1D1O95968 90 aa4□□□□□ -1.77
NPIPB3-214ENST00000545358 PLA2G1BP04054 148 aaKnown RBP4□□□□□ -1.77
NPIPB3-214ENST00000545358 MGPP08493 103 aa4□□□□□ -1.77
NPIPB3-214ENST00000545358 RBMY1A1P0DJD3 496 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms