RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CRYBA4P53673 196 aa11.98□□□□□ -0.49
SNRNP70-203ENST00000544278 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
SNRNP70-203ENST00000544278 RNF223E7ERA6 249 aa11.98□□□□□ -0.49
SNRNP70-203ENST00000544278 S100A4P26447 101 aaKnown RBP11.98□□□□□ -0.49
SNRNP70-203ENST00000544278 WFDC2Q14508 124 aa11.98□□□□□ -0.49
SNRNP70-203ENST00000544278 JPT2Q9H910 190 aa11.98□□□□□ -0.49
SNRNP70-203ENST00000544278 PRSS1P07477 247 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 MGPP08493 103 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 FABP2P12104 132 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 ETDBQ3ZM63 59 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 ADAMTSL5Q6ZMM2 481 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 C14orf178Q8N769 122 aaPredicted RBP11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 AMTNQ6UX39 209 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 TENM4Q6N022 2769 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 MUC4Q99102 2169 aa11.97□□□□□ -0.49
SNRNP70-203ENST00000544278 TRAV12-2A0A075B6T6 113 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 HTN1P15515 57 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 Q6AWC8 147 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 TMEM158Q8WZ71 300 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 IFI27L1Q96BM0 104 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 SLC50A1Q9BRV3 221 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 BEX4Q9NWD9 120 aaPredicted RBP11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 A0A1W2PPM0 123 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 GAGE12HA6NDE8 117 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 ZNF688P0C7X2 276 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 SEC11AP67812 179 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 DEFB136Q30KP8 78 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 SAMD5Q5TGI4 173 aa11.96□□□□□ -0.49
SNRNP70-203ENST00000544278 LINC01545Q5VT33 79 aa11.96□□□□□ -0.5
SNRNP70-203ENST00000544278 PET117Q6UWS5 81 aa11.96□□□□□ -0.5
SNRNP70-203ENST00000544278 IGHV7-4-1A0A0J9YVY3 117 aa11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 CRXO43186 299 aaPredicted RBP11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 HBDP02042 147 aa11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 PRM2P04554 102 aa11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 UBR5O95071 2799 aaPredicted RBP11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 H3BRM9 83 aa11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 ANXA2RQ3ZCQ2 193 aa11.95□□□□□ -0.5
SNRNP70-203ENST00000544278 INSL3P51460 131 aa11.94□□□□□ -0.5
SNRNP70-203ENST00000544278 C11orf44Q8N8P7 122 aa11.94□□□□□ -0.5
SNRNP70-203ENST00000544278 MAP1LC3AQ9H492 121 aa11.94□□□□□ -0.5
SNRNP70-203ENST00000544278 FOXC2Q99958 501 aa11.94□□□□□ -0.5
SNRNP70-203ENST00000544278 A6NDX4 124 aa11.94□□□□□ -0.5
SNRNP70-203ENST00000544278 C18orf65Q6ZTR6 163 aa11.94□□□□□ -0.5
SNRNP70-203ENST00000544278 SPXQ9BT56 116 aa11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 IGHG2P01859 326 aa11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 LINC01559Q495D7 138 aa11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 SHISA2Q6UWI4 295 aa11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 GTSCR1Q86UQ5 136 aa11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 PSMG3-AS1Q96PY0 264 aa11.93□□□□□ -0.5
SNRNP70-203ENST00000544278 IGKV2D-26A0A0A0MRZ7 120 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 ZFAND2AQ8N6M9 145 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 LINC00477Q96M19 166 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 MS4A6AQ9H2W1 248 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 TRAV12-3A0A0B4J271 114 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 C19orf54Q5BKX5 351 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 TMEM160Q9NX00 188 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 NHP2Q9NX24 153 aaKnown RBP11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 U3KQE9 123 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 U3KQK5 164 aa11.92□□□□□ -0.5
SNRNP70-203ENST00000544278 A0A087WWL8 130 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 H3BMG7 143 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 FCER1GP30273 86 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 FXYD2P54710 66 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 SYNJ2BPP57105 145 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 KHDC1LQ5JSQ8 128 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 A0A1B0GW15 77 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 EMP1P54849 157 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 ZC2HC1BQ5TFG8 222 aa11.91□□□□□ -0.5
SNRNP70-203ENST00000544278 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
SNRNP70-203ENST00000544278 B4DSR2 109 aa11.9□□□□□ -0.5
SNRNP70-203ENST00000544278 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
SNRNP70-203ENST00000544278 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
SNRNP70-203ENST00000544278 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.51
SNRNP70-203ENST00000544278 PSMG4Q5JS54 123 aa11.9□□□□□ -0.51
SNRNP70-203ENST00000544278 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.51
SNRNP70-203ENST00000544278 PHLDA3Q9Y5J5 127 aa11.9□□□□□ -0.51
SNRNP70-203ENST00000544278 GATA3P23771 443 aa11.89□□□□□ -0.51
SNRNP70-203ENST00000544278 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
SNRNP70-203ENST00000544278 FGF6P10767 208 aa11.89□□□□□ -0.51
SNRNP70-203ENST00000544278 AKAP9Q99996 3911 aa11.89□□□□□ -0.51
SNRNP70-203ENST00000544278 SMIM13P0DJ93 91 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 SRSF1Q07955 248 aaKnown RBP eCLIP11.88□□□□□ -0.514e-16■■□□□ 11.7
SNRNP70-203ENST00000544278 C9orf47Q6ZRZ4 202 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 NDUFA4O00483 81 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 GATD1Q8NB37 220 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 SMIM17P0DL12 118 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 OR5A1Q8NGJ0 315 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 TMEM190Q8WZ59 177 aa11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 SPAG8Q99932 426 aaPredicted RBP11.88□□□□□ -0.51
SNRNP70-203ENST00000544278 COX8CQ7Z4L0 72 aa11.87□□□□□ -0.51
SNRNP70-203ENST00000544278 SS18L2Q9UHA2 77 aa11.87□□□□□ -0.51
SNRNP70-203ENST00000544278 DAZ1Q9NQZ3 744 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms