RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 LINC00588Q9Y4M8 146 aa3.42□□□□□ -1.86
SMCO2-206ENST00000543991 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
SMCO2-206ENST00000543991 IGHV3-21A0A0B4J1V1 117 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 RIIAD1A6NNX1 92 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 OR7C1O76099 320 aaPredicted RBP3.41□□□□□ -1.86
SMCO2-206ENST00000543991 C1QBP02746 253 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 CTSDP07339 412 aaPredicted RBP3.41□□□□□ -1.86
SMCO2-206ENST00000543991 SAA2P0DJI9 122 aaPredicted RBP3.41□□□□□ -1.86
SMCO2-206ENST00000543991 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 SMIM11AP58511 58 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 MORN2Q502X0 79 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 Q6ZRN7 208 aaPredicted RBP3.41□□□□□ -1.86
SMCO2-206ENST00000543991 EIF4E3Q8N5X7 224 aaKnown RBP3.41□□□□□ -1.86
SMCO2-206ENST00000543991 OR8J3Q8NGG0 315 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 MCFD2Q8NI22 146 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 GNPDA2Q8TDQ7 276 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 TBX5Q99593 518 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 POMPQ9Y244 141 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 TRAPPC1Q9Y5R8 145 aa3.41□□□□□ -1.86
SMCO2-206ENST00000543991 A0A087WTM6 91 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 PRH1P02810 166 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 OR10J4P0C629 311 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 KRTAP10-8P60410 259 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 RAB5BP61020 215 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 FAM78BQ5VT40 261 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 ELP2Q6IA86 826 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 SFXN4Q6P4A7 337 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 IFT20Q8IY31 132 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 YIPF3Q9GZM5 350 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 TAS2R1Q9NYW7 299 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 JPT1Q9UK76 154 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 R4GMQ9 66 aa3.4□□□□□ -1.87
SMCO2-206ENST00000543991 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.87
SMCO2-206ENST00000543991 IGKV1OR2-108A0A075B7D4 117 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 TRBV7-1A0A0A6YYK4 115 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 IGKV1-9A0A0C4DH69 117 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 TMEM250H0YL14 139 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 AIPO00170 330 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 PDE6DO43924 150 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 YPEL1O60688 119 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 IGKV1-17P01599 117 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 HBZP02008 142 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 APELAP0DMC3 54 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 SULT1A3P0DMM9 295 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 SULT1A4P0DMN0 295 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 CXCL3P19876 107 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 KRTAP10-4P60372 401 aaPredicted RBP3.39□□□□□ -1.87
SMCO2-206ENST00000543991 TTC9CQ8N5M4 171 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 OR4X1Q8NH49 305 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 DIRAS2Q96HU8 199 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 YPEL2Q96QA6 119 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 GINS3Q9BRX5 216 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 TSSK6Q9BXA6 273 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 OR51E2Q9H255 320 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 CMC2Q9NRP2 79 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 ZNF586Q9NXT0 402 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 ZNF492Q9P255 531 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 TRAPPC2LQ9UL33 140 aa3.39□□□□□ -1.87
SMCO2-206ENST00000543991 CARHSP1Q9Y2V2 147 aaKnown RBP3.39□□□□□ -1.87
SMCO2-206ENST00000543991 LINC00587B1AMM8 73 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 C8orf87E5RJ46 101 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 GADD45GO95257 159 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 IGKV1-16P04430 117 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 ESDP10768 282 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 EMP1P54849 157 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 DEFB131AP59861 70 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 SURF2Q15527 256 aaPredicted RBP3.38□□□□□ -1.87
SMCO2-206ENST00000543991 WHAMMP3Q1A5X7 153 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 ACOT6Q3I5F7 207 aaPredicted RBP3.38□□□□□ -1.87
SMCO2-206ENST00000543991 OR8D4Q8NGM9 314 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 UPK3BQ9BT76 320 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 SPANXA1Q9NS26 97 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 ICOSQ9Y6W8 199 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 PKHD1L1Q86WI1 4243 aa3.38□□□□□ -1.87
SMCO2-206ENST00000543991 IGSF23A1L1A6 192 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 F8W036 122 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 H3BQ85 93 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 ARL6IP5O75915 188 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 APOA2P02652 100 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 CRYGDP07320 174 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 RNASE2P10153 161 aaKnown RBP3.37□□□□□ -1.87
SMCO2-206ENST00000543991 CXCL2P19875 107 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 PPP1CCP36873 323 aaKnown RBP3.37□□□□□ -1.87
SMCO2-206ENST00000543991 DAD1P61803 113 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 RHOBP62745 196 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 SAMD13Q5VXD3 122 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 BORCS7Q96B45 105 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 PYURFQ96I23 114 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 SS18L2Q9UHA2 77 aa3.37□□□□□ -1.87
SMCO2-206ENST00000543991 TRAV2A0A0B4J234 112 aa3.36□□□□□ -1.87
SMCO2-206ENST00000543991 TEX50A0A1B0GTY4 177 aa3.36□□□□□ -1.87
SMCO2-206ENST00000543991 SLC17A3O00476 420 aa3.36□□□□□ -1.87
SMCO2-206ENST00000543991 CREBL2O60519 120 aaPredicted RBP3.36□□□□□ -1.87
SMCO2-206ENST00000543991 PFDN1O60925 122 aa3.36□□□□□ -1.87
SMCO2-206ENST00000543991 OR5G3P0C626 314 aa3.36□□□□□ -1.87
SMCO2-206ENST00000543991 HIST1H1BP16401 226 aaKnown RBP3.36□□□□□ -1.87
SMCO2-206ENST00000543991 BATFQ16520 125 aa3.36□□□□□ -1.87
SMCO2-206ENST00000543991 MPV17LQ2QL34 196 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms