RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 ATP1A1-AS1Q5TC04 95 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 ODF3Q96PU9 254 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 KLK9Q9UKQ9 250 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 MALRD1Q5VYJ5 2156 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 IGLV4-69A0A075B6H9 119 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 IGIPA6NJ69 53 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 PRAC2D3DTV9 90 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 CDX4O14627 284 aaPredicted RBP3.81□□□□□ -1.8
LMO3-229ENST00000543721 DUSP14O95147 198 aaKnown RBP3.81□□□□□ -1.8
LMO3-229ENST00000543721 IGHV1-69P01742 117 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 MGPP08493 103 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 FAM27E3Q08E93 113 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 YAE1D1Q9NRH1 226 aa3.81□□□□□ -1.8
LMO3-229ENST00000543721 RHOHQ15669 191 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 ZNF876PQ49A33 203 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 FAM110DQ8TAY7 271 aaPredicted RBP3.8□□□□□ -1.8
LMO3-229ENST00000543721 TP53TG1Q9Y2A0 90 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 FAM215AQ9Y5M1 114 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 ARFGEF3Q5TH69 2177 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 M0R1W7 72 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 CRYGDP07320 174 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 IGFL4Q6B9Z1 124 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 DNAJC30Q96LL9 226 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 S4R3C0 116 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 CADP27708 2225 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 CRLF1O75462 422 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 TGFAP01135 160 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 PRB4P10163 310 aaPredicted RBP3.8□□□□□ -1.8
LMO3-229ENST00000543721 C1orf210Q8IVY1 113 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 C16orf92Q96LL3 132 aa3.8□□□□□ -1.8
LMO3-229ENST00000543721 ZNF256Q9Y2P7 627 aaPredicted RBP3.8□□□□□ -1.8
LMO3-229ENST00000543721 TRBV6-5A0A0K0K1A5 114 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 BSPH1Q075Z2 132 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 TCF15Q12870 199 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 MINOS1Q5TGZ0 78 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 TRPT1Q86TN4 253 aaKnown RBP3.79□□□□□ -1.8
LMO3-229ENST00000543721 C14orf178Q8N769 122 aaPredicted RBP3.79□□□□□ -1.8
LMO3-229ENST00000543721 LY6G5BQ8NDX9 201 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 EEF1AKMT3Q96AZ1 226 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 RPL39LQ96EH5 51 aaKnown RBP3.79□□□□□ -1.8
LMO3-229ENST00000543721 MINOS1-NBL1R4GNA1 71 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 RIF1Q5UIP0 2472 aaKnown RBP3.79□□□□□ -1.8
LMO3-229ENST00000543721 TRBV7-1A0A0A6YYK4 115 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 LINC01548A6NM66 108 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 NXPH4O95158 308 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
LMO3-229ENST00000543721 EBI3Q14213 229 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 Q6ZS46 218 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 MUSTN1Q8IVN3 82 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 RNF182Q8N6D2 247 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 ABCA1O95477 2261 aa3.79□□□□□ -1.8
LMO3-229ENST00000543721 SPTAN1Q13813 2472 aaKnown RBP3.79□□□□□ -1.8
LMO3-229ENST00000543721 IGHV4-39P01824 125 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 ANXA2RQ3ZCQ2 193 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 IGFL3Q6UXB1 125 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 GPHB5Q86YW7 130 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 AMELXQ99217 191 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 SVILO95425 2214 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 UQCRQO14949 82 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 CRIP2P52943 208 aaPredicted RBP3.78□□□□□ -1.8
LMO3-229ENST00000543721 ZNF56Q15929 161 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 C5orf47Q569G3 176 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 LRRC75A-AS1Q8N1F1 130 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 NRGNQ92686 78 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 ARRDC1-AS1Q9H2J1 176 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 VPREB3Q9UKI3 123 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 ICOSQ9Y6W8 199 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 U3KQE9 123 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 ZDBF2Q9HCK1 2354 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 TRBV27A0A0K0K1C4 114 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 A0A1B0GX51 115 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 H7C2G1 150 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 Q8N6K4 173 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 COPS9Q8WXC6 57 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 CUL9Q8IWT3 2517 aa3.78□□□□□ -1.8
LMO3-229ENST00000543721 SPTA1P02549 2419 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 ODF3BA8MYP8 253 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 TSHBP01222 138 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 IGHV3-23P01764 117 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 TSPEAR-AS2P59090 65 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 C15orf32Q32M92 178 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 NSUN5P1Q3KNT7 163 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 Q6ZQT7 251 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 LINC00643Q86TS7 51 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 APRG1Q8IVJ8 170 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 C3orf22Q8N5N4 141 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 H7C423 109 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 TRIAP1O43715 76 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 CXCL5P42830 114 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 EMP1P54849 157 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 C9orf153Q5TBE3 101 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 ZFAND2AQ8N6M9 145 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 J3KT08 172 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 LST1O00453 97 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
LMO3-229ENST00000543721 ITLN2Q8WWU7 325 aaPredicted RBP3.77□□□□□ -1.81
LMO3-229ENST00000543721 LINC01587Q99440 93 aa3.77□□□□□ -1.81
LMO3-229ENST00000543721 IGHV7-81A0A0B4J1V7 117 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms