RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 C11orf44Q8N8P7 122 aa15.13■□□□□ 0.01
SUDS3-204ENST00000543473 KLHL30-AS1Q8NEE0 82 aa15.13■□□□□ 0.01
SUDS3-204ENST00000543473 RHODO00212 210 aa15.13■□□□□ 0.01
SUDS3-204ENST00000543473 DEFB131AP59861 70 aa15.13■□□□□ 0.01
SUDS3-204ENST00000543473 TRAV12-2A0A075B6T6 113 aa15.12■□□□□ 0.01
SUDS3-204ENST00000543473 PIEZO2Q9H5I5 2752 aa15.12■□□□□ 0.01
SUDS3-204ENST00000543473 HTN3P15516 51 aa15.12■□□□□ 0.01
SUDS3-204ENST00000543473 GNRH2O43555 120 aa15.12■□□□□ 0.01
SUDS3-204ENST00000543473 ODF1Q14990 250 aa15.12■□□□□ 0.01
SUDS3-204ENST00000543473 UTF1Q5T230 341 aa15.12■□□□□ 0.01
SUDS3-204ENST00000543473 INSP01308 110 aa15.12■□□□□ 0.01
SUDS3-204ENST00000543473 FOXI1Q12951 378 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 LINC00322Q6ZN03 302 aaPredicted RBP15.11■□□□□ 0.01
SUDS3-204ENST00000543473 UBE2E2Q96LR5 201 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 LENEPQ9Y5L5 61 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 SPANXDQ9BXN6 97 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 RUSC1-AS1Q66K80 236 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 RPL39LQ96EH5 51 aaKnown RBP15.11■□□□□ 0.01
SUDS3-204ENST00000543473 CSPG4Q6UVK1 2322 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 IGHV1-69DA0A0B4J2H0 117 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 LOXL1Q08397 574 aaPredicted RBP15.11■□□□□ 0.01
SUDS3-204ENST00000543473 ANKRD29Q8N6D5 301 aa15.11■□□□□ 0.01
SUDS3-204ENST00000543473 SOCS3O14543 225 aa15.1■□□□□ 0.01
SUDS3-204ENST00000543473 WISP2O76076 250 aa15.1■□□□□ 0.01
SUDS3-204ENST00000543473 TNRC6AQ8NDV7 1962 aaKnown RBP15.09■□□□□ 0.01
SUDS3-204ENST00000543473 CR1LQ2VPA4 569 aa15.09■□□□□ 0.01
SUDS3-204ENST00000543473 MBD6Q96DN6 1003 aa15.09■□□□□ 0.01
SUDS3-204ENST00000543473 MRPL53Q96EL3 112 aaKnown RBP15.09■□□□□ 0.01
SUDS3-204ENST00000543473 F6UB75 175 aa15.09■□□□□ 0.01
SUDS3-204ENST00000543473 MAPK1IP1LQ8NDC0 245 aa15.09■□□□□ 0.01
SUDS3-204ENST00000543473 PTPN13Q12923 2485 aa15.09■□□□□ 0.01
SUDS3-204ENST00000543473 MED12LQ86YW9 2145 aa15.09■□□□□ 0.01
SUDS3-204ENST00000543473 IGHV3-16A0A0C4DH30 117 aa15.09■□□□□ 0.01
SUDS3-204ENST00000543473 PLXNB1O43157 2135 aa15.08■□□□□ 0
SUDS3-204ENST00000543473 CITED1Q99966 193 aa15.08■□□□□ 0
SUDS3-204ENST00000543473 VWC2LB2RUY7 222 aa15.08■□□□□ 0
SUDS3-204ENST00000543473 RNF223E7ERA6 249 aa15.08■□□□□ 0
SUDS3-204ENST00000543473 PRR14LQ5THK1 2151 aa15.08■□□□□ 0
SUDS3-204ENST00000543473 A4D1N5 150 aa15.08■□□□□ 0
SUDS3-204ENST00000543473 IGLV2-23P01705 113 aa15.08■□□□□ 0
SUDS3-204ENST00000543473 IGKV1D-37A0A075B6S9 117 aa15.07■□□□□ 0
SUDS3-204ENST00000543473 IGHV3-38A0A0C4DH36 116 aa15.07■□□□□ 0
SUDS3-204ENST00000543473 RNASE13Q5GAN3 156 aaKnown RBP15.07■□□□□ 0
SUDS3-204ENST00000543473 IGHG4P01861 327 aa15.07■□□□□ 0
SUDS3-204ENST00000543473 MSMBP08118 114 aa15.07■□□□□ 0
SUDS3-204ENST00000543473 IGLV11-55A0A075B6I3 123 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 TRAV26-1A0A087WT03 109 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 TRBV6-1A0A0K0K1D8 114 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 CTSGP08311 255 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 RNF114Q9Y508 228 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 KIAA1549LQ6ZVL6 1849 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 LINC01356Q8N9X3 169 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 RHOHQ15669 191 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 MLST8Q9BVC4 326 aa15.06■□□□□ 0
SUDS3-204ENST00000543473 TRAV12-1A0A0B4J245 112 aa15.05■□□□□ 0
SUDS3-204ENST00000543473 SMIM20Q8N5G0 67 aa15.05■□□□□ 0
SUDS3-204ENST00000543473 ATRXP46100 2492 aa15.05■□□□□ 0
SUDS3-204ENST00000543473 CRYGCP07315 174 aa15.05■□□□□ 0
SUDS3-204ENST00000543473 IGFBPL1Q8WX77 278 aa15.05■□□□□ 0
SUDS3-204ENST00000543473 CRYBA4P53673 196 aa15.05■□□□□ -0
SUDS3-204ENST00000543473 SEM1Q6ZVN7 128 aa15.05■□□□□ -0
SUDS3-204ENST00000543473 TEX22C9J3V5 150 aa15.04■□□□□ -0
SUDS3-204ENST00000543473 SRSF2Q01130 221 aaKnown RBP15.04■□□□□ -0
SUDS3-204ENST00000543473 TMEM131Q92545 1883 aa15.04■□□□□ -0
SUDS3-204ENST00000543473 PRAC2D3DTV9 90 aa15.04■□□□□ -0
SUDS3-204ENST00000543473 E9PLD3 99 aa15.04■□□□□ -0
SUDS3-204ENST00000543473 PFN2P35080 140 aa15.04■□□□□ -0
SUDS3-204ENST00000543473 BUB3O43684 328 aa15.03■□□□□ -0
SUDS3-204ENST00000543473 IGHV1-69P01742 117 aa15.03■□□□□ -0
SUDS3-204ENST00000543473 EIF4EBP1Q13541 118 aaPredicted RBP15.03■□□□□ -0
SUDS3-204ENST00000543473 IGHV7-4-1A0A0J9YVY3 117 aa15.03■□□□□ -0
SUDS3-204ENST00000543473 WI2-2373I1.2A0A1W2PRP0 233 aa15.03■□□□□ -0
SUDS3-204ENST00000543473 ZNRF2Q8NHG8 242 aa15.03■□□□□ -0
SUDS3-204ENST00000543473 MUSTN1Q8IVN3 82 aa15.03■□□□□ -0
SUDS3-204ENST00000543473 XCL2Q9UBD3 114 aa15.02■□□□□ -0
SUDS3-204ENST00000543473 PTPRSQ13332 1948 aa15.02■□□□□ -0
SUDS3-204ENST00000543473 LINC01620Q4KN68 170 aa15.02■□□□□ -0
SUDS3-204ENST00000543473 ZFP2Q6ZN57 461 aa15.02□□□□□ -0.01
SUDS3-204ENST00000543473 PTH2Q96A98 100 aa15.02□□□□□ -0.01
SUDS3-204ENST00000543473 TLN1Q9Y490 2541 aaKnown RBP15.02□□□□□ -0.01
SUDS3-204ENST00000543473 MSMPQ1L6U9 139 aa15.01□□□□□ -0.01
SUDS3-204ENST00000543473 A0A0J9YXV3 536 aa15□□□□□ -0.01
SUDS3-204ENST00000543473 TRACP01848 142 aa15□□□□□ -0.01
SUDS3-204ENST00000543473 NPBQ8NG41 125 aa15□□□□□ -0.01
SUDS3-204ENST00000543473 CGB3P0DN86 165 aa15□□□□□ -0.01
SUDS3-204ENST00000543473 CGB7P0DN87 165 aa15□□□□□ -0.01
SUDS3-204ENST00000543473 CMC4P56277 68 aaPredicted RBP15□□□□□ -0.01
SUDS3-204ENST00000543473 IGHV7-81A0A0B4J1V7 117 aa15□□□□□ -0.01
SUDS3-204ENST00000543473 BAALCQ8WXS3 180 aa15□□□□□ -0.01
SUDS3-204ENST00000543473 HERVK_113P63121 156 aa14.99□□□□□ -0.01
SUDS3-204ENST00000543473 PRSS47A8MTI9 375 aa14.99□□□□□ -0.01
SUDS3-204ENST00000543473 SUMO4Q6EEV6 95 aa14.99□□□□□ -0.01
SUDS3-204ENST00000543473 DSCAML1Q8TD84 2053 aa14.99□□□□□ -0.01
SUDS3-204ENST00000543473 ATP6V0E2Q8NHE4 81 aa14.99□□□□□ -0.01
SUDS3-204ENST00000543473 MUC22E2RYF6 1773 aaPredicted RBP14.99□□□□□ -0.01
SUDS3-204ENST00000543473 TRAV13-2A0A0B4J235 113 aa14.98□□□□□ -0.01
SUDS3-204ENST00000543473 SS18Q15532 418 aa14.98□□□□□ -0.01
SUDS3-204ENST00000543473 TOMM6Q96B49 74 aa14.98□□□□□ -0.01
SUDS3-204ENST00000543473 IGLV1-47P01700 117 aa14.98□□□□□ -0.01
SUDS3-204ENST00000543473 RPL35AP18077 110 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms