RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 HBDP02042 147 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 SMIM15Q7Z3B0 74 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 Q8N8P6 123 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 DPF1Q92782 380 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 MRAP2Q96G30 205 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 NXT2Q9NPJ8 142 aaKnown RBP10.51□□□□□ -0.73
LDB3-207ENST00000542786 PEMTQ9UBM1 199 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 KIF25-AS1Q9Y6Z4 181 aa10.51□□□□□ -0.73
LDB3-207ENST00000542786 M0R381 172 aa10.5□□□□□ -0.73
LDB3-207ENST00000542786 DUSP14O95147 198 aaKnown RBP10.5□□□□□ -0.73
LDB3-207ENST00000542786 IGLL1P15814 213 aa10.5□□□□□ -0.73
LDB3-207ENST00000542786 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
LDB3-207ENST00000542786 LINC00315P59091 139 aa10.5□□□□□ -0.73
LDB3-207ENST00000542786 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
LDB3-207ENST00000542786 SNHG12Q9BXW3 62 aa10.5□□□□□ -0.73
LDB3-207ENST00000542786 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
LDB3-207ENST00000542786 ANK3Q12955 4377 aaKnown RBP10.5□□□□□ -0.73
LDB3-207ENST00000542786 MUC4Q99102 2169 aa10.5□□□□□ -0.73
LDB3-207ENST00000542786 FXYD7P58549 80 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 KHDC1LQ5JSQ8 128 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 MCRIP2Q9BUT9 160 aaKnown RBP10.49□□□□□ -0.73
LDB3-207ENST00000542786 TMEM160Q9NX00 188 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 AKAP9Q99996 3911 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 IGHV3-16A0A0C4DH30 117 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 CD28P10747 220 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 DEFB114Q30KQ6 69 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 ZNF705AQ6ZN79 300 aaPredicted RBP10.49□□□□□ -0.73
LDB3-207ENST00000542786 MRPL52Q86TS9 123 aaKnown RBP10.49□□□□□ -0.73
LDB3-207ENST00000542786 DPH3P1Q9H4G8 78 aa10.49□□□□□ -0.73
LDB3-207ENST00000542786 TSPOP30536 169 aa10.48□□□□□ -0.73
LDB3-207ENST00000542786 CDKN1BP46527 198 aa10.48□□□□□ -0.73
LDB3-207ENST00000542786 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
LDB3-207ENST00000542786 LINC01006Q8NI28 216 aa10.48□□□□□ -0.73
LDB3-207ENST00000542786 RASL10AQ92737 203 aa10.48□□□□□ -0.73
LDB3-207ENST00000542786 UQCR10Q9UDW1 63 aa10.48□□□□□ -0.73
LDB3-207ENST00000542786 AGRNO00468 2067 aa10.48□□□□□ -0.73
LDB3-207ENST00000542786 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 RBMY1BA6NDE4 496 aaKnown RBP10.47□□□□□ -0.73
LDB3-207ENST00000542786 RBMY1EA6NEQ0 496 aaKnown RBP10.47□□□□□ -0.73
LDB3-207ENST00000542786 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 RBMY1DP0C7P1 496 aaKnown RBP10.47□□□□□ -0.73
LDB3-207ENST00000542786 HLA-DRB4P13762 266 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 FCER1GP30273 86 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
LDB3-207ENST00000542786 HLA-DRB4X5D2U9 266 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 RBMY1A1P0DJD3 496 aaKnown RBP10.47□□□□□ -0.73
LDB3-207ENST00000542786 RBMY1CP0DJD4 496 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 DEFB131AP59861 70 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
LDB3-207ENST00000542786 LBHQ53QV2 105 aaPredicted RBP10.47□□□□□ -0.73
LDB3-207ENST00000542786 AP1S3Q96PC3 154 aa10.47□□□□□ -0.73
LDB3-207ENST00000542786 hDV102S1A0JD36 115 aa10.46□□□□□ -0.74
LDB3-207ENST00000542786 H3BMM0 161 aa10.46□□□□□ -0.74
LDB3-207ENST00000542786 CD7P09564 240 aa10.46□□□□□ -0.74
LDB3-207ENST00000542786 HILS1P60008 231 aa10.46□□□□□ -0.74
LDB3-207ENST00000542786 ST20Q9HBF5 79 aa10.46□□□□□ -0.74
LDB3-207ENST00000542786 ZNF256Q9Y2P7 627 aaPredicted RBP10.46□□□□□ -0.74
LDB3-207ENST00000542786 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 LGALS9CQ6DKI2 356 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 IFI27L1Q96BM0 104 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 CITED2Q99967 270 aaPredicted RBP10.45□□□□□ -0.74
LDB3-207ENST00000542786 PMCHL2Q9BQD1 86 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 MAP6D1Q9H9H5 199 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 MDFICQ9P1T7 246 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 MTORP42345 2549 aa10.45□□□□□ -0.74
LDB3-207ENST00000542786 IGHV1OR15-1A0A075B7D0 117 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 CCL24O00175 119 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 ZNF124Q15973 351 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 CD300EQ496F6 205 aaPredicted RBP10.44□□□□□ -0.74
LDB3-207ENST00000542786 Q8N1Y9 231 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 SMR3AQ99954 134 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 SORL1Q92673 2214 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 M0R143 59 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 RPL39LQ96EH5 51 aaKnown RBP10.44□□□□□ -0.74
LDB3-207ENST00000542786 C20orf78Q9BR46 151 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 JPT2Q9H910 190 aa10.44□□□□□ -0.74
LDB3-207ENST00000542786 H0Y8G0 127 aa10.43□□□□□ -0.74
LDB3-207ENST00000542786 NDUFA7O95182 113 aa10.43□□□□□ -0.74
LDB3-207ENST00000542786 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
LDB3-207ENST00000542786 DYNLRB2Q8TF09 96 aa10.43□□□□□ -0.74
LDB3-207ENST00000542786 HECTD1Q9ULT8 2610 aa10.43□□□□□ -0.74
LDB3-207ENST00000542786 TRAV25A0A0B4J276 109 aa10.42□□□□□ -0.74
LDB3-207ENST00000542786 A0A1W2PRX2 142 aa10.42□□□□□ -0.74
LDB3-207ENST00000542786 ADARB2-AS1A8MUL3 147 aa10.42□□□□□ -0.74
LDB3-207ENST00000542786 SUMO2P61956 95 aaKnown RBP10.42□□□□□ -0.74
LDB3-207ENST00000542786 LURAP1LQ8IV03 231 aa10.42□□□□□ -0.74
LDB3-207ENST00000542786 SPAG8Q99932 426 aaPredicted RBP10.42□□□□□ -0.74
LDB3-207ENST00000542786 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
LDB3-207ENST00000542786 NF1P21359 2839 aa10.42□□□□□ -0.74
LDB3-207ENST00000542786 MGPP08493 103 aa10.42□□□□□ -0.74
LDB3-207ENST00000542786 LAGE3Q14657 143 aa10.42□□□□□ -0.74
LDB3-207ENST00000542786 Q6ZN92 141 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms