RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 WIPF1O43516 503 aa12.93□□□□□ -0.34
RAB6A-208ENST00000541795 RPL35AP18077 110 aaKnown RBP12.93□□□□□ -0.34
RAB6A-208ENST00000541795 SRIP30626 198 aa12.93□□□□□ -0.34
RAB6A-208ENST00000541795 DEFB125Q8N687 156 aa12.93□□□□□ -0.34
RAB6A-208ENST00000541795 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
RAB6A-208ENST00000541795 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
RAB6A-208ENST00000541795 IGHV3-16A0A0C4DH30 117 aa12.92□□□□□ -0.34
RAB6A-208ENST00000541795 STAB1Q9NY15 2570 aa12.92□□□□□ -0.34
RAB6A-208ENST00000541795 CBY3A6NI87 242 aa12.92□□□□□ -0.34
RAB6A-208ENST00000541795 M0R381 172 aa12.92□□□□□ -0.34
RAB6A-208ENST00000541795 SPRY2O43597 315 aa12.92□□□□□ -0.34
RAB6A-208ENST00000541795 TMEM191AQ9H0A3 160 aa12.92□□□□□ -0.34
RAB6A-208ENST00000541795 HTN1P15515 57 aa12.91□□□□□ -0.34
RAB6A-208ENST00000541795 FAM104BQ5XKR9 115 aa12.91□□□□□ -0.34
RAB6A-208ENST00000541795 AMN1Q8IY45 258 aa12.91□□□□□ -0.34
RAB6A-208ENST00000541795 LINC01587Q99440 93 aa12.91□□□□□ -0.34
RAB6A-208ENST00000541795 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
RAB6A-208ENST00000541795 C9orf85Q96MD7 179 aa12.9□□□□□ -0.34
RAB6A-208ENST00000541795 COA6Q5JTJ3 125 aaKnown RBP12.9□□□□□ -0.34
RAB6A-208ENST00000541795 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-208ENST00000541795 SMIM15Q7Z3B0 74 aa12.9□□□□□ -0.34
RAB6A-208ENST00000541795 ALKBH7Q9BT30 221 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-208ENST00000541795 MUC4Q99102 2169 aa12.9□□□□□ -0.34
RAB6A-208ENST00000541795 UBE2CO00762 179 aa12.89□□□□□ -0.35
RAB6A-208ENST00000541795 HOXA5P20719 270 aa12.89□□□□□ -0.35
RAB6A-208ENST00000541795 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
RAB6A-208ENST00000541795 TMEM256Q8N2U0 113 aa12.89□□□□□ -0.35
RAB6A-208ENST00000541795 LINC00467Q9BRT7 94 aa12.89□□□□□ -0.35
RAB6A-208ENST00000541795 TMEM208Q9BTX3 173 aa12.89□□□□□ -0.35
RAB6A-208ENST00000541795 NXPH4O95158 308 aa12.88□□□□□ -0.35
RAB6A-208ENST00000541795 GIG44P09565 113 aaPredicted RBP12.88□□□□□ -0.35
RAB6A-208ENST00000541795 EVI2AP22794 236 aa12.88□□□□□ -0.35
RAB6A-208ENST00000541795 Q0VG73 95 aa12.88□□□□□ -0.35
RAB6A-208ENST00000541795 OR10J3Q5JRS4 329 aa12.88□□□□□ -0.35
RAB6A-208ENST00000541795 C1orf158Q8N1D5 194 aa12.88□□□□□ -0.35
RAB6A-208ENST00000541795 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
RAB6A-208ENST00000541795 PRM2P04554 102 aa12.87□□□□□ -0.35
RAB6A-208ENST00000541795 MRPL51Q4U2R6 128 aaKnown RBP12.87□□□□□ -0.35
RAB6A-208ENST00000541795 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
RAB6A-208ENST00000541795 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
RAB6A-208ENST00000541795 RNF185Q96GF1 192 aa12.87□□□□□ -0.35
RAB6A-208ENST00000541795 COL6A5A8TX70 2615 aa12.87□□□□□ -0.35
RAB6A-208ENST00000541795 IGHV3OR16-12A0A075B7B8 117 aa12.86□□□□□ -0.35
RAB6A-208ENST00000541795 D6R8Y8 96 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 RAB4AP20338 218 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 ZNF415Q09FC8 603 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 OXLD1Q5BKU9 147 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 PDZD11Q5EBL8 140 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 SYT8Q8NBV8 401 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 IQCJQ1A5X6 159 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 HIST3H2BBQ8N257 126 aa12.85□□□□□ -0.35
RAB6A-208ENST00000541795 ORMDL3Q8N138 153 aa12.84□□□□□ -0.35
RAB6A-208ENST00000541795 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
RAB6A-208ENST00000541795 U3KQK5 164 aa12.84□□□□□ -0.35
RAB6A-208ENST00000541795 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
RAB6A-208ENST00000541795 CKS2P33552 79 aa12.83□□□□□ -0.35
RAB6A-208ENST00000541795 C14orf178Q8N769 122 aaPredicted RBP12.83□□□□□ -0.35
RAB6A-208ENST00000541795 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.35
RAB6A-208ENST00000541795 SERF1AO75920 110 aa12.83□□□□□ -0.36
RAB6A-208ENST00000541795 LINC00310P59036 64 aa12.83□□□□□ -0.36
RAB6A-208ENST00000541795 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
RAB6A-208ENST00000541795 RCHY1Q96PM5 261 aa12.83□□□□□ -0.36
RAB6A-208ENST00000541795 GSN-AS1Q9NRJ2 163 aa12.83□□□□□ -0.36
RAB6A-208ENST00000541795 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
RAB6A-208ENST00000541795 NCR2O95944 276 aa12.82□□□□□ -0.36
RAB6A-208ENST00000541795 S100A2P29034 98 aa12.82□□□□□ -0.36
RAB6A-208ENST00000541795 C11orf72Q8NBR9 251 aa12.82□□□□□ -0.36
RAB6A-208ENST00000541795 PRELID3AQ96N28 172 aa12.82□□□□□ -0.36
RAB6A-208ENST00000541795 IFITM10A6NMD0 228 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 NUPR1O60356 82 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 PPBPP02775 128 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 AZU1P20160 251 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 ZNF876PQ49A33 203 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 ANK2Q01484 3957 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 SMIM17P0DL12 118 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 JPT2Q9H910 190 aa12.81□□□□□ -0.36
RAB6A-208ENST00000541795 M0R2P5 195 aa12.8□□□□□ -0.36
RAB6A-208ENST00000541795 MGPP08493 103 aa12.8□□□□□ -0.36
RAB6A-208ENST00000541795 KRTAP10-11P60412 298 aa12.79□□□□□ -0.36
RAB6A-208ENST00000541795 EGFEM1PQ0D2K5 195 aa12.79□□□□□ -0.36
RAB6A-208ENST00000541795 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
RAB6A-208ENST00000541795 RNASE8Q8TDE3 154 aaKnown RBP12.79□□□□□ -0.36
RAB6A-208ENST00000541795 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
RAB6A-208ENST00000541795 SPXQ9BT56 116 aa12.79□□□□□ -0.36
RAB6A-208ENST00000541795 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
RAB6A-208ENST00000541795 TRAV26-2A0A0B4J265 109 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 GAS8-AS1O95177 125 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 NPYP01303 97 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 ESDP10768 282 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 AKR1D1P51857 326 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 MRAP2Q96G30 205 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 A0A087WWL8 130 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 FABP4P15090 132 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 RNASEKQ6P5S7 137 aaKnown RBP12.78□□□□□ -0.36
RAB6A-208ENST00000541795 MDFIQ99750 246 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 LAMTOR2Q9Y2Q5 125 aa12.78□□□□□ -0.36
RAB6A-208ENST00000541795 KIR2DL5BA0A0G2JN68 375 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms