RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 RPL11P62913 178 aaKnown RBP7.42□□□□□ -1.22
LMO3-227ENST00000541764 TAL2Q16559 108 aa7.42□□□□□ -1.22
LMO3-227ENST00000541764 ZC2HC1BQ5TFG8 222 aa7.42□□□□□ -1.22
LMO3-227ENST00000541764 WFDC3Q8IUB2 231 aa7.42□□□□□ -1.22
LMO3-227ENST00000541764 MRPL35Q9NZE8 188 aaKnown RBP7.42□□□□□ -1.22
LMO3-227ENST00000541764 DOPEY1Q5JWR5 2465 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 IGKV2D-26A0A0A0MRZ7 120 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 TRAV8-6A0A0B4J262 113 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 TRBV6-5A0A0K0K1A5 114 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 F6UB75 175 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 K7EQG2 157 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 GNRH2O43555 120 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 IGHV4-59P01825 116 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 AMMECR1LQ6DCA0 310 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 C14orf178Q8N769 122 aaPredicted RBP7.41□□□□□ -1.22
LMO3-227ENST00000541764 NEXN-AS1Q8NBZ9 246 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 C9orf85Q96MD7 179 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 TM2D2Q9BX73 214 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 CBY1Q9Y3M2 126 aa7.41□□□□□ -1.22
LMO3-227ENST00000541764 CACNA1AO00555 2505 aa7.4□□□□□ -1.22
LMO3-227ENST00000541764 A0A0J9YX75 114 aa7.4□□□□□ -1.22
LMO3-227ENST00000541764 LGALS1P09382 135 aaKnown RBP7.4□□□□□ -1.22
LMO3-227ENST00000541764 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
LMO3-227ENST00000541764 UFSP1Q6NVU6 142 aa7.4□□□□□ -1.22
LMO3-227ENST00000541764 FAM159AQ6UWV7 190 aa7.4□□□□□ -1.22
LMO3-227ENST00000541764 Q6YL49 198 aa7.4□□□□□ -1.22
LMO3-227ENST00000541764 LCNL1Q6ZST4 164 aa7.4□□□□□ -1.22
LMO3-227ENST00000541764 VPREB3Q9UKI3 123 aa7.4□□□□□ -1.22
LMO3-227ENST00000541764 CHD8Q9HCK8 2581 aa7.4□□□□□ -1.23
LMO3-227ENST00000541764 PKD1L2Q7Z442 2459 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 A8MTW9 85 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 DUSP14O95147 198 aaKnown RBP7.39□□□□□ -1.23
LMO3-227ENST00000541764 DEFB1P60022 68 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 SNRPD3P62318 126 aaKnown RBP7.39□□□□□ -1.23
LMO3-227ENST00000541764 ERASQ7Z444 233 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
LMO3-227ENST00000541764 UBE2E2Q96LR5 201 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 SCGB3A1Q96QR1 104 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 TMEM160Q9NX00 188 aa7.39□□□□□ -1.23
LMO3-227ENST00000541764 TRAV2A0A0B4J234 112 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 J3KRW8 73 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 C2orf66Q6UXQ4 117 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 GTSCR1Q86UQ5 136 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 LRRC75A-AS1Q8N1F1 130 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 Q8N2B8 174 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 CHAC1Q9BUX1 264 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 AKAP6Q13023 2319 aa7.38□□□□□ -1.23
LMO3-227ENST00000541764 IGHV3-16A0A0C4DH30 117 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 VCYO14598 125 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 SMIM13P0DJ93 91 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 RIPPLY3P57055 190 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 TMEM95Q3KNT9 176 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 TMEM141Q96I45 108 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 CSTL1Q9H114 145 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 ZNF702PQ9H963 129 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 EDA2RQ9HAV5 297 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 BEX4Q9NWD9 120 aaPredicted RBP7.37□□□□□ -1.23
LMO3-227ENST00000541764 CHTOPQ9Y3Y2 248 aaKnown RBP7.37□□□□□ -1.23
LMO3-227ENST00000541764 ASH1LQ9NR48 2969 aaKnown RBP7.37□□□□□ -1.23
LMO3-227ENST00000541764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.37□□□□□ -1.23
LMO3-227ENST00000541764 CSMD1Q96PZ7 3565 aa7.37□□□□□ -1.23
LMO3-227ENST00000541764 TRBV27A0A0K0K1C4 114 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 GAGE10A6NGK3 116 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 K7EP34 96 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 TGFAP01135 160 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 MGPP08493 103 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 COX6B1P14854 86 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 EDN2P20800 178 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 CDKN1BP46527 198 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 RBX1P62877 108 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 FOXI2Q6ZQN5 318 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 CEND1Q8N111 149 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 SYT8Q8NBV8 401 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 OR5A1Q8NGJ0 315 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 RNASE8Q8TDE3 154 aaKnown RBP7.36□□□□□ -1.23
LMO3-227ENST00000541764 PHLDA1Q8WV24 401 aaPredicted RBP7.36□□□□□ -1.23
LMO3-227ENST00000541764 TIMM17AQ99595 171 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 CYSLTR1Q9Y271 337 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 ZNF256Q9Y2P7 627 aaPredicted RBP7.36□□□□□ -1.23
LMO3-227ENST00000541764 IGKV3-7A0A075B6H7 116 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 IGHV1OR15-1A0A075B7D0 117 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 IGIPA6NJ69 53 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 E9PLD3 99 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 CD7P09564 240 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 IGHV4-31P0DP07 118 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 SRD5A1P18405 259 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 PIK3CD-AS1Q5SR53 167 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 SUMO4Q6EEV6 95 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 AMTNQ6UX39 209 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 JMJD8Q96S16 334 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 KRTAP4-12Q9BQ66 201 aa7.36□□□□□ -1.23
LMO3-227ENST00000541764 TRAV12-3A0A0B4J271 114 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 GAGE12BA1L429 117 aa7.35□□□□□ -1.23
LMO3-227ENST00000541764 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms