RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SNRPEP62304 92 aaKnown RBP5.96□□□□□ -1.46
YBX3-211ENST00000541351 FAM74A1Q5RGS3 127 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 TMEM78Q5T7P6 136 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 CYP2G1PQ6ZSU1 146 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 ZNF546Q86UE3 836 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 SLC25A29Q8N8R3 303 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 OR51S1Q8NGJ8 323 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 CIB3Q96Q77 187 aaPredicted RBP5.96□□□□□ -1.46
YBX3-211ENST00000541351 KLK12Q9UKR0 248 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 TNFSF18Q9UNG2 199 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 IGHV3-64A0A075B6Q5 118 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 COLCA2A8K830 154 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 USP17L23D6RBM5 183 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 MED6O75586 246 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 HIST1H1EP10412 219 aaKnown RBP5.95□□□□□ -1.46
YBX3-211ENST00000541351 H2BFSP57053 126 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 RNASE10Q5GAN6 216 aaKnown RBP5.95□□□□□ -1.46
YBX3-211ENST00000541351 FAM159AQ6UWV7 190 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 NIT1Q86X76 327 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 CBLN2Q8IUK8 224 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 SELENOHQ8IZQ5 122 aaKnown RBP5.95□□□□□ -1.46
YBX3-211ENST00000541351 ARL6IP6Q8N6S5 226 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 TERB2Q8NHR7 220 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 SAT2Q96F10 170 aaPredicted RBP5.95□□□□□ -1.46
YBX3-211ENST00000541351 ARV1Q9H2C2 271 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 PLAC8Q9NZF1 115 aa5.95□□□□□ -1.46
YBX3-211ENST00000541351 IGHV3-16A0A0C4DH30 117 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 C9orf170A2RU37 121 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 MRPS12O15235 138 aaKnown RBP5.94□□□□□ -1.46
YBX3-211ENST00000541351 ZNF253O75346 499 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 AKAIN1P0CW23 69 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 MGST1P10620 155 aaKnown RBP5.94□□□□□ -1.46
YBX3-211ENST00000541351 TPT1P13693 172 aaKnown RBP5.94□□□□□ -1.46
YBX3-211ENST00000541351 ADCYAP1P18509 176 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 TBPP20226 339 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 CACNG7P62955 275 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 EIF5AP63241 154 aaKnown RBP5.94□□□□□ -1.46
YBX3-211ENST00000541351 LHFPL1Q86WI0 220 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 Q8N3U1 123 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 PFDN5Q99471 154 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 SLC25A21Q9BQT8 299 aaPredicted RBP5.94□□□□□ -1.46
YBX3-211ENST00000541351 ZNF471Q9BX82 626 aaPredicted RBP5.94□□□□□ -1.46
YBX3-211ENST00000541351 NAA60Q9H7X0 242 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 UQCC1Q9NVA1 299 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 MTFP1Q9UDX5 166 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 KCNIP3Q9Y2W7 256 aa5.94□□□□□ -1.46
YBX3-211ENST00000541351 TRBV7-9A0A0J9YWB2 115 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 SMCO3A2RU48 225 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 NDUFS6O75380 124 aaKnown RBP5.93□□□□□ -1.46
YBX3-211ENST00000541351 HLA-DQA1P01909 254 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 PRSS1P07477 247 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 EIF5AL1Q6IS14 154 aaKnown RBP5.93□□□□□ -1.46
YBX3-211ENST00000541351 TMEM182Q6ZP80 229 aaPredicted RBP5.93□□□□□ -1.46
YBX3-211ENST00000541351 LINC00305Q7Z4B0 112 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 INO80EQ8NBZ0 244 aaPredicted RBP5.93□□□□□ -1.46
YBX3-211ENST00000541351 HIST1H2BAQ96A08 127 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 FAM19A4Q96LR4 140 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 TREM1Q9NP99 234 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
YBX3-211ENST00000541351 SLC17A3O00476 420 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 RAB4AP20338 218 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 CAV2P51636 162 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 CNBPP62633 177 aaKnown RBP5.92□□□□□ -1.46
YBX3-211ENST00000541351 FABP9Q0Z7S8 132 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 TMEM183BQ1AE95 376 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 Q6ZQT7 251 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 TMEM183AQ8IXX5 376 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 ZFP82Q8N141 532 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 CYB561D1Q8N8Q1 229 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 OR13C8Q8NGS7 320 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 SPACA4Q8TDM5 124 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 C2orf88Q9BSF0 95 aa5.92□□□□□ -1.46
YBX3-211ENST00000541351 A0A0B4J2A0 478 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 C5orf51A6NDU8 294 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 FGF8P55075 233 aaPredicted RBP5.91□□□□□ -1.46
YBX3-211ENST00000541351 UBE2MP61081 183 aaKnown RBP5.91□□□□□ -1.46
YBX3-211ENST00000541351 SRPXP78539 464 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 CYCSP99999 105 aaKnown RBP5.91□□□□□ -1.46
YBX3-211ENST00000541351 ERCC8Q13216 396 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 SURF2Q15527 256 aaPredicted RBP5.91□□□□□ -1.46
YBX3-211ENST00000541351 MUC21Q5SSG8 566 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 Q6ZRP5 223 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 TMEM229BQ8NBD8 167 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 GGACTQ9BVM4 153 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 AGPAT4-IT1Q9H0P7 198 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 AAMDCQ9H7C9 122 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 SHPKQ9UHJ6 478 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 CBY1Q9Y3M2 126 aa5.91□□□□□ -1.46
YBX3-211ENST00000541351 COX7A2P2O60397 106 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 HOXB5P09067 269 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 SNRPCP09234 159 aaKnown RBP5.9□□□□□ -1.46
YBX3-211ENST00000541351 IGLC2P0DOY2 106 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 RAB5AP20339 215 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 S100A2P29034 98 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 TAS2R19P59542 299 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 PKIAP61925 76 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 RHEBQ15382 184 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 SCGB2B2Q4G0G5 96 aa5.9□□□□□ -1.46
YBX3-211ENST00000541351 ZFAND2AQ8N6M9 145 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms