RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 NEGR1Q7Z3B1 354 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 USMG5Q96IX5 58 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 FOXC2Q99958 501 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 HIGD1BQ9P298 99 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 GTSCR1Q86UQ5 136 aa13.01□□□□□ -0.33
SPIDR-227ENST00000541342 VPREB3Q9UKI3 123 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 CUBNO60494 3623 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 K7ERJ3 54 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
SPIDR-227ENST00000541342 CHAC1Q9BUX1 264 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 TRBV25-1A0A075B6N4 114 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 RAB9AP51151 201 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 UNQ9165/PRO28630Q6UXU0 137 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 ZNF580Q9UK33 172 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 SPCS1Q9Y6A9 102 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 U3KQE9 123 aa13□□□□□ -0.33
SPIDR-227ENST00000541342 AGRNO00468 2067 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 GCSHP23434 173 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 C10orf99Q6UWK7 81 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 SMIM15Q7Z3B0 74 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 METTL26Q96S19 204 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 GCN1Q92616 2671 aaKnown RBP12.99□□□□□ -0.33
SPIDR-227ENST00000541342 G3V4G9 280 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 S100A7P31151 101 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
SPIDR-227ENST00000541342 HOXA3O43365 443 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-227ENST00000541342 SLC50A1Q9BRV3 221 aa12.98□□□□□ -0.33
SPIDR-227ENST00000541342 CCDC168Q8NDH2 2452 aa12.98□□□□□ -0.33
SPIDR-227ENST00000541342 K7EMI3 77 aa12.98□□□□□ -0.33
SPIDR-227ENST00000541342 MRPL35Q9NZE8 188 aaKnown RBP12.98□□□□□ -0.33
SPIDR-227ENST00000541342 FLNAP21333 2647 aaKnown RBP12.98□□□□□ -0.33
SPIDR-227ENST00000541342 PRSS47A8MTI9 375 aa12.98□□□□□ -0.33
SPIDR-227ENST00000541342 DPM2O94777 84 aa12.98□□□□□ -0.33
SPIDR-227ENST00000541342 RIPPLY3P57055 190 aa12.98□□□□□ -0.33
SPIDR-227ENST00000541342 C8orf86Q6ZUL3 223 aa12.98□□□□□ -0.33
SPIDR-227ENST00000541342 PRR9Q5T870 116 aa12.97□□□□□ -0.33
SPIDR-227ENST00000541342 TLN2Q9Y4G6 2542 aa12.97□□□□□ -0.33
SPIDR-227ENST00000541342 PSMB8P28062 276 aa12.97□□□□□ -0.33
SPIDR-227ENST00000541342 SAMD5Q5TGI4 173 aa12.97□□□□□ -0.33
SPIDR-227ENST00000541342 MAPKAPK5-AS1Q8N8E1 139 aa12.97□□□□□ -0.33
SPIDR-227ENST00000541342 SMIM13P0DJ93 91 aa12.96□□□□□ -0.33
SPIDR-227ENST00000541342 NDUFA4O00483 81 aa12.96□□□□□ -0.34
SPIDR-227ENST00000541342 ATP5LO75964 103 aa12.96□□□□□ -0.34
SPIDR-227ENST00000541342 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.34
SPIDR-227ENST00000541342 TMEM160Q9NX00 188 aa12.96□□□□□ -0.34
SPIDR-227ENST00000541342 SMPXQ9UHP9 88 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 UNC79Q9P2D8 2635 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 LAGE3Q14657 143 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 C9orf47Q6ZRZ4 202 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 ZNF702PQ9H963 129 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 UFC1Q9Y3C8 167 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 FABP2P12104 132 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 TMEM78Q5T7P6 136 aa12.95□□□□□ -0.34
SPIDR-227ENST00000541342 ANK3Q12955 4377 aaKnown RBP12.95□□□□□ -0.34
SPIDR-227ENST00000541342 DUX5Q96PT3 197 aa12.94□□□□□ -0.34
SPIDR-227ENST00000541342 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
SPIDR-227ENST00000541342 CEND1Q8N111 149 aa12.94□□□□□ -0.34
SPIDR-227ENST00000541342 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
SPIDR-227ENST00000541342 GLMPQ8WWB7 406 aa12.93□□□□□ -0.34
SPIDR-227ENST00000541342 C20orf173Q96LM9 149 aa12.93□□□□□ -0.34
SPIDR-227ENST00000541342 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
SPIDR-227ENST00000541342 H3BVH4 76 aa12.92□□□□□ -0.34
SPIDR-227ENST00000541342 NHP2Q9NX24 153 aaKnown RBP12.92□□□□□ -0.34
SPIDR-227ENST00000541342 A0A087WX48 190 aa12.92□□□□□ -0.34
SPIDR-227ENST00000541342 SPRY2O43597 315 aa12.92□□□□□ -0.34
SPIDR-227ENST00000541342 SPANXN1Q5VSR9 72 aa12.91□□□□□ -0.34
SPIDR-227ENST00000541342 MYOZ3Q8TDC0 251 aa12.9□□□□□ -0.34
SPIDR-227ENST00000541342 GPHB5Q86YW7 130 aa12.9□□□□□ -0.34
SPIDR-227ENST00000541342 SONP18583 2426 aaKnown RBP12.9□□□□□ -0.34
SPIDR-227ENST00000541342 EDN2P20800 178 aa12.9□□□□□ -0.35
SPIDR-227ENST00000541342 KRTAP1-1Q07627 177 aa12.9□□□□□ -0.35
SPIDR-227ENST00000541342 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
SPIDR-227ENST00000541342 SMIM2Q9BVW6 85 aa12.89□□□□□ -0.35
SPIDR-227ENST00000541342 E9PLD3 99 aa12.88□□□□□ -0.35
SPIDR-227ENST00000541342 DEFB1P60022 68 aa12.88□□□□□ -0.35
SPIDR-227ENST00000541342 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
SPIDR-227ENST00000541342 J3KRW8 73 aa12.88□□□□□ -0.35
SPIDR-227ENST00000541342 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
SPIDR-227ENST00000541342 RASL10AQ92737 203 aa12.88□□□□□ -0.35
SPIDR-227ENST00000541342 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
SPIDR-227ENST00000541342 IGLL5B9A064 214 aa12.87□□□□□ -0.35
SPIDR-227ENST00000541342 PLNP26678 52 aa12.87□□□□□ -0.35
SPIDR-227ENST00000541342 MRAP2Q96G30 205 aa12.87□□□□□ -0.35
SPIDR-227ENST00000541342 Q8N2B8 174 aa12.86□□□□□ -0.35
SPIDR-227ENST00000541342 RPL39LQ96EH5 51 aaKnown RBP12.86□□□□□ -0.35
SPIDR-227ENST00000541342 DAZ1Q9NQZ3 744 aaKnown RBP12.86□□□□□ -0.35
SPIDR-227ENST00000541342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-227ENST00000541342 MUC4Q99102 2169 aa12.86□□□□□ -0.35
SPIDR-227ENST00000541342 ACANP16112 2415 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 TRAV12-1A0A0B4J245 112 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 F8VRH5 84 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 SOCS3O14543 225 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 RHPN1-AS1Q9BWJ2 59 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 TRBV7-3A0A075B6L6 115 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 NF1P21359 2839 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms