RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ATP6V0CP27449 155 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 CD300CQ08708 224 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 ZNF415Q09FC8 603 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 OR5I1Q13606 314 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 TDRG1Q3Y452 100 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 AKR1C8PQ5T2L2 129 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 FAM159AQ6UWV7 190 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 Q75L30 129 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 C5orf17Q8NAS9 161 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 HSD17B11Q8NBQ5 300 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 STOML3Q8TAV4 291 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 PHYHIPLQ96FC7 376 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 KCNS1Q96KK3 526 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 HYLS1Q96M11 299 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 TCEAL7Q9BRU2 100 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 GSN-AS1Q9NRJ2 163 aa3.98□□□□□ -1.77
SUDS3-202ENST00000541280 TENM2Q9NT68 2774 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
SUDS3-202ENST00000541280 TRGV1A0A0A0MS02 117 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 A0A0D9SG52 128 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 CTXND1A0A1B0GTU2 59 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 HMSDA8MTL9 139 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 UMAD1C9J7I0 102 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 F6UZH7 168 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 SPINK4O60575 86 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 GCHFRP30047 84 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 PPT1P50897 306 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 RAB2AP61019 212 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 BTN1A1Q13410 526 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 ZNF345Q14585 488 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 IQCF2Q8IXL9 164 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 C11orf72Q8NBR9 251 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 RASL10AQ92737 203 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 TREM1Q9NP99 234 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 EPDR1Q9UM22 224 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 KLF12Q9Y4X4 402 aa3.97□□□□□ -1.77
SUDS3-202ENST00000541280 TRAV26-1A0A087WT03 109 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 A0A1W2PPQ1 181 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 RNF222A6NCQ9 220 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 KRTAP16-1A8MUX0 517 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 K7EP13 123 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 TCRAP04437 139 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 ARL14EPLP0DKL9 152 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 FHITP49789 147 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 LGALSLQ3ZCW2 172 aaPredicted RBP3.96□□□□□ -1.78
SUDS3-202ENST00000541280 ZFP69Q49AA0 526 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 Q5BKY6 102 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 TTC32Q5I0X7 151 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 C1orf134Q5TEV5 83 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 RPL7L1Q6DKI1 246 aaKnown RBP3.96□□□□□ -1.78
SUDS3-202ENST00000541280 EIF5AL1Q6IS14 154 aaKnown RBP3.96□□□□□ -1.78
SUDS3-202ENST00000541280 GOLT1AQ6ZVE7 132 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 SH2D6Q7Z4S9 175 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 HIST1H2BAQ96A08 127 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 PTH2Q96A98 100 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 UPK3BQ9BT76 320 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 PRO0255Q9UI72 69 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 ARL2-SNX15V9GYD0 113 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 NBEAL2Q6ZNJ1 2754 aa3.96□□□□□ -1.78
SUDS3-202ENST00000541280 M0R2P5 195 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 ARPC5O15511 151 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 TSHBP01222 138 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 IFNA7P01567 189 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 ORM1P02763 201 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 S100A9P06702 114 aaKnown RBP3.95□□□□□ -1.78
SUDS3-202ENST00000541280 PFN1P07737 140 aaKnown RBP3.95□□□□□ -1.78
SUDS3-202ENST00000541280 SEC11BP0C7V7 166 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 FLI1Q01543 452 aaPredicted RBP3.95□□□□□ -1.78
SUDS3-202ENST00000541280 MRPL23Q16540 153 aaKnown RBP3.95□□□□□ -1.78
SUDS3-202ENST00000541280 SMUG1Q53HV7 270 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 DPPA3Q6W0C5 159 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 Q6ZR54 194 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 Q6ZTI0 123 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 SSX7Q7RTT5 188 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 KCNRGQ8N5I3 272 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 CYB561D1Q8N8Q1 229 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 TMEM75Q8N9X5 138 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 ZNRF2Q8NHG8 242 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 Q8TAT8 98 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 SH3BGRL3Q9H299 93 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 Q9H8V8 135 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 PSG8Q9UQ74 426 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 HHLA3Q9XRX5 114 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 ZFP30Q9Y2G7 519 aa3.95□□□□□ -1.78
SUDS3-202ENST00000541280 TRAV9-2A0A087WT02 112 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 A0A087X002 238 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 TRAV4A0A0B4J268 109 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 TRGV4A0A0C4DH28 118 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 KANTRA0A1W2PQU2 76 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 FABP5P3A8MUU1 101 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 HMGB3O15347 200 aaKnown RBP3.94□□□□□ -1.78
SUDS3-202ENST00000541280 PRB4P10163 310 aaPredicted RBP3.94□□□□□ -1.78
SUDS3-202ENST00000541280 RAB5CP51148 216 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 TMEM183BQ1AE95 376 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 PRR9Q5T870 116 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 NEGR1Q7Z3B1 354 aa3.94□□□□□ -1.78
SUDS3-202ENST00000541280 TMEM183AQ8IXX5 376 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms