RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SNAPINO95295 136 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 ARMS2P0C7Q2 107 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 MIFP14174 115 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 S100A4P26447 101 aaKnown RBP6.69□□□□□ -1.34
DDX55-208ENST00000541259 ASIPP42127 132 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 RPS20P60866 119 aaKnown RBP6.69□□□□□ -1.34
DDX55-208ENST00000541259 CT83Q5H943 113 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 TSKUQ8WUA8 353 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 C16orf74Q96GX8 76 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 C9orf85Q96MD7 179 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 ZMAT4Q9H898 229 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 RPS10P5Q9NQ39 176 aa6.69□□□□□ -1.34
DDX55-208ENST00000541259 PPP1R2P9O14990 202 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 CXCL1P09341 107 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 SSTP61278 116 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 ZNF415Q09FC8 603 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 RHEBQ15382 184 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 LYZL1Q6UWQ5 148 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 ZNF493Q6ZR52 646 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 FER1L6-AS1Q8NA97 138 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 IL17DQ8TAD2 202 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 TPPP3Q9BW30 176 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 NOP10Q9NPE3 64 aaKnown RBP6.68□□□□□ -1.34
DDX55-208ENST00000541259 SCRT2Q9NQ03 307 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 IL36BQ9NZH7 164 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 FBN3Q75N90 2809 aa6.68□□□□□ -1.34
DDX55-208ENST00000541259 A0A087WWC5 75 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 A0A0J9YWU9 116 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 SMIM27A0A1W2PRY6 76 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 XKRY2A2RUG3 117 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 HIGD1CA8MV81 97 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 SNURFLB1AK76 121 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 SNAI2O43623 268 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 FOXA3P55318 350 aaPredicted RBP6.67□□□□□ -1.34
DDX55-208ENST00000541259 FAM3BP58499 235 aaPredicted RBP6.67□□□□□ -1.34
DDX55-208ENST00000541259 Q6ZTI0 123 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 NUP35Q8NFH5 326 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 OR10AG1Q8NH19 301 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 CTDSP1Q9GZU7 261 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 MRPL16Q9NX20 251 aaKnown RBP6.67□□□□□ -1.34
DDX55-208ENST00000541259 CELA1Q9UNI1 258 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 DNAH7Q8WXX0 4024 aa6.67□□□□□ -1.34
DDX55-208ENST00000541259 SPINK4O60575 86 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 SCO1O75880 301 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 OR5AL1P0C617 328 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 NHLRC4P0CG21 123 aaPredicted RBP6.66□□□□□ -1.34
DDX55-208ENST00000541259 MED14OSP0DP75 135 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 FAM222AQ5U5X8 452 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 SPXQ9BT56 116 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 JPT2Q9H910 190 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 MSRB1Q9NZV6 116 aa6.66□□□□□ -1.34
DDX55-208ENST00000541259 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 TRGV1A0A0A0MS02 117 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 A0A1W2PPQ1 181 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 FAM231BA6NCW3 169 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 M0R2P5 195 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 M0R381 172 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 S100A1P23297 94 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 CTRLP40313 264 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 DAZ2Q13117 558 aaKnown RBP6.65□□□□□ -1.34
DDX55-208ENST00000541259 ZNF876PQ49A33 203 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 C11orf68Q9H3H3 251 aaKnown RBP6.65□□□□□ -1.34
DDX55-208ENST00000541259 TMEM242Q9NWH2 141 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 DKK2Q9UBU2 259 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 PHLDA3Q9Y5J5 127 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 URGCP-MRPS24S4R325 110 aa6.65□□□□□ -1.34
DDX55-208ENST00000541259 TGP01266 2768 aa6.65□□□□□ -1.35
DDX55-208ENST00000541259 DYNC2H1Q8NCM8 4307 aaKnown RBP6.64□□□□□ -1.35
DDX55-208ENST00000541259 GAGE12BA1L429 117 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 F2Z2F3 143 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 GAGE7O76087 117 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 GAGE12FP0CL80 117 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 GAGE12GP0CL81 117 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 GAGE12IP0CL82 117 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 NTF3P20783 257 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
DDX55-208ENST00000541259 TMEM88Q6PEY1 159 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 CBLN2Q8IUK8 224 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 RASL10AQ92737 203 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 IMMP2LQ96T52 175 aa6.64□□□□□ -1.35
DDX55-208ENST00000541259 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 LYRM9A8MSI8 78 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 NXPH4O95158 308 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 SPART-AS1P0CW21 52 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 DEFB130BP0DP73 79 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 DEFB130AP0DP74 79 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 CACNG7P62955 275 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 TWIST1Q15672 202 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 XP32Q5T750 250 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 ZFP82Q8N141 532 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 LINC00612Q8N6U2 182 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 POM121L12Q8N7R1 296 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 PTH2Q96A98 100 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms