RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 Q8N8P6 123 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
DDB1-217ENST00000540166 NTN5Q8WTR8 489 aaPredicted RBP6.78□□□□□ -1.32
DDB1-217ENST00000540166 PRADC1Q9BSG0 188 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 TRBV19A0A075B6N1 114 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 A0A1W2PPI3 338 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 Q8TAT8 98 aa6.78□□□□□ -1.32
DDB1-217ENST00000540166 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
DDB1-217ENST00000540166 MGPP08493 103 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 MRPL36Q9P0J6 103 aaKnown RBP6.77□□□□□ -1.33
DDB1-217ENST00000540166 PRSS2P07478 247 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 ZNF56Q15929 161 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 MSMPQ1L6U9 139 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 PIFOQ8TCI5 191 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 TMEM190Q8WZ59 177 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 RNF125Q96EQ8 232 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 ORMDL2Q53FV1 153 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 C9orf153Q5TBE3 101 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 NFE4Q86UQ8 179 aa6.77□□□□□ -1.33
DDB1-217ENST00000540166 E7EUB6 86 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 GATA1P15976 413 aaPredicted RBP6.76□□□□□ -1.33
DDB1-217ENST00000540166 DIAPH2-AS1Q14236 149 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 C17orf77Q96MU5 243 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 HHLA3Q9XRX5 114 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 S4R3C0 116 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 CRYGCP07315 174 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 TMEM200BQ69YZ2 307 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 TMEM14CQ9P0S9 112 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 NOTCH3Q9UM47 2321 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 IGKV1D-37A0A075B6S9 117 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 RHODO00212 210 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 DLX6P56179 175 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 MSRB1Q9NZV6 116 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 LOC400499M0QZD8 3231 aa6.76□□□□□ -1.33
DDB1-217ENST00000540166 STAB1Q9NY15 2570 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 SRSF2Q01130 221 aaKnown RBP6.75□□□□□ -1.33
DDB1-217ENST00000540166 ATXN8Q156A1 80 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 ASPMQ8IZT6 3477 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 CGB1A6NKQ9 187 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 TCL1BO95988 128 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 MAP1AP78559 2803 aaPredicted RBP6.75□□□□□ -1.33
DDB1-217ENST00000540166 WI2-2373I1.2A0A1W2PRP0 233 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 J3KRW8 73 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 PAPPA-AS1Q5QFB9 102 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 C11orf71Q6IPW1 123 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 SHANK2-AS3Q9BTD1 123 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 PRO0461Q9UI25 63 aa6.75□□□□□ -1.33
DDB1-217ENST00000540166 TRAV4A0A0B4J268 109 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 H3BMM0 161 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 CGB3P0DN86 165 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 CGB7P0DN87 165 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 EGR2P11161 476 aaPredicted RBP6.74□□□□□ -1.33
DDB1-217ENST00000540166 PIP4P2Q8N4L2 257 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 UBE2WQ96B02 151 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 U3KQK5 164 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 COL6A5A8TX70 2615 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 LHBP01229 141 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 ID1P41134 155 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 PVRIGQ6DKI7 326 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 PRR25Q96S07 402 aa6.74□□□□□ -1.33
DDB1-217ENST00000540166 F5H697 171 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 LGALS1P09382 135 aaKnown RBP6.73□□□□□ -1.33
DDB1-217ENST00000540166 BRD3OSQ6XYD6 125 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 ZNF833PQ6ZTB9 187 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 TMEM178BH3BS89 294 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 M0R381 172 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 LY6EQ16553 131 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 OR13C6PQ8NH95 151 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 LAMA5O15230 3695 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 IGLV3-9A0A075B6K5 115 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 TRBV7-3A0A075B6L6 115 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 TRAV26-2A0A0B4J265 109 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 LOXP28300 417 aaPredicted RBP6.73□□□□□ -1.33
DDB1-217ENST00000540166 LYPD2Q6UXB3 125 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 SPATA3Q8NHX4 192 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 HIVEP1P15822 2718 aa6.73□□□□□ -1.33
DDB1-217ENST00000540166 MFAP4P55083 255 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 MORN3Q6PF18 240 aaPredicted RBP6.72□□□□□ -1.33
DDB1-217ENST00000540166 SIGLEC15Q6ZMC9 328 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 GATA4P43694 442 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 KLHL30-AS1Q8NEE0 82 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 IGHV3-35A0A0C4DH35 117 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 TRBV6-1A0A0K0K1D8 114 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 CNTFRP26992 372 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 CRIP1P50238 77 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 PDE6HQ13956 83 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 IGFL4Q6B9Z1 124 aa6.72□□□□□ -1.33
DDB1-217ENST00000540166 M0QXV9 152 aa6.71□□□□□ -1.33
DDB1-217ENST00000540166 IGLV2-11P01706 119 aa6.71□□□□□ -1.33
DDB1-217ENST00000540166 PMVKQ15126 192 aa6.71□□□□□ -1.33
DDB1-217ENST00000540166 NDUFA11Q86Y39 141 aa6.71□□□□□ -1.33
DDB1-217ENST00000540166 CARD19Q96LW7 228 aa6.71□□□□□ -1.33
DDB1-217ENST00000540166 PHLDA3Q9Y5J5 127 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 804.2 ms