RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 GTSF1LQ9H1H1 148 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 Q9HAA7 133 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 APOBP04114 4563 aaKnown RBP10.31□□□□□ -0.76
UBE3B-211ENST00000539843 IBA57-AS1B1ANH7 110 aa10.31□□□□□ -0.76
UBE3B-211ENST00000539843 PTTG1O95997 202 aa10.31□□□□□ -0.76
UBE3B-211ENST00000539843 ZNF506Q5JVG8 444 aa10.31□□□□□ -0.76
UBE3B-211ENST00000539843 NKX6-2Q9C056 277 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-211ENST00000539843 BATF3Q9NR55 127 aa10.31□□□□□ -0.76
UBE3B-211ENST00000539843 A0A1W2PRE2 83 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 GGTLC3B5MD39 225 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 IGHV3-33P01772 117 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 IGHV3-30-3P0DP02 117 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 ASIPP42127 132 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
UBE3B-211ENST00000539843 KRTAP10-1P60331 282 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 LAGE3Q14657 143 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 LGALSLQ3ZCW2 172 aaPredicted RBP10.3□□□□□ -0.76
UBE3B-211ENST00000539843 TOR2AQ5JU69 321 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 Q5VSD8 79 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 SYT8Q8NBV8 401 aa10.3□□□□□ -0.76
UBE3B-211ENST00000539843 FABP5P3A8MUU1 101 aa10.29□□□□□ -0.76
UBE3B-211ENST00000539843 FAM229AH3BQW9 127 aa10.29□□□□□ -0.76
UBE3B-211ENST00000539843 XGP55808 180 aa10.29□□□□□ -0.76
UBE3B-211ENST00000539843 PIK3CD-AS1Q5SR53 167 aa10.29□□□□□ -0.76
UBE3B-211ENST00000539843 ZFP2Q6ZN57 461 aa10.29□□□□□ -0.76
UBE3B-211ENST00000539843 A0A087WWC5 75 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 TRAV8-3A0A0A6YYJ7 113 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 CTXND1A0A1B0GTU2 59 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 GIPP09681 153 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-211ENST00000539843 SEC11BP0C7V7 166 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 FGF8P55075 233 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-211ENST00000539843 AKR1C8PQ5T2L2 129 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 Q8N814 137 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 TMEM70Q9BUB7 260 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 C11orf21Q9P2W6 132 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 URGCP-MRPS24S4R325 110 aa10.28□□□□□ -0.76
UBE3B-211ENST00000539843 FXYD6-FXYD2A0A087WZ82 144 aa10.27□□□□□ -0.77
UBE3B-211ENST00000539843 RHODO00212 210 aa10.27□□□□□ -0.77
UBE3B-211ENST00000539843 IGLV2-11P01706 119 aa10.27□□□□□ -0.77
UBE3B-211ENST00000539843 RNASE3P12724 160 aaKnown RBP10.27□□□□□ -0.77
UBE3B-211ENST00000539843 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.77
UBE3B-211ENST00000539843 HIST1H2BAQ96A08 127 aa10.27□□□□□ -0.77
UBE3B-211ENST00000539843 PARLQ9H300 379 aa10.27□□□□□ -0.77
UBE3B-211ENST00000539843 ARL2-SNX15V9GYD0 113 aa10.27□□□□□ -0.77
UBE3B-211ENST00000539843 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 B4DEV8 164 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 PEX7O00628 323 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 UBE2G1P62253 170 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 GAGE1Q13065 139 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 GAGE4Q13068 117 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 GAGE5Q13069 117 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 GAGE13Q4V321 117 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 KCNIP4Q6PIL6 250 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 RMI2Q96E14 147 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 COX11Q9Y6N1 276 aa10.26□□□□□ -0.77
UBE3B-211ENST00000539843 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
UBE3B-211ENST00000539843 UBE2G2P60604 165 aa10.25□□□□□ -0.77
UBE3B-211ENST00000539843 RPL7L1Q6DKI1 246 aaKnown RBP10.25□□□□□ -0.77
UBE3B-211ENST00000539843 OR11H4Q8NGC9 324 aa10.25□□□□□ -0.77
UBE3B-211ENST00000539843 STOML3Q8TAV4 291 aa10.25□□□□□ -0.77
UBE3B-211ENST00000539843 TRAV34A0A0B4J273 112 aa10.24□□□□□ -0.77
UBE3B-211ENST00000539843 Q6ZSN1 163 aa10.24□□□□□ -0.77
UBE3B-211ENST00000539843 Q86TA4 180 aa10.24□□□□□ -0.77
UBE3B-211ENST00000539843 OR2T35Q8NGX2 323 aa10.24□□□□□ -0.77
UBE3B-211ENST00000539843 TCEAL7Q9BRU2 100 aa10.24□□□□□ -0.77
UBE3B-211ENST00000539843 ZFP30Q9Y2G7 519 aa10.24□□□□□ -0.77
UBE3B-211ENST00000539843 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
UBE3B-211ENST00000539843 IGKV3D-20A0A0C4DH25 116 aa10.23□□□□□ -0.77
UBE3B-211ENST00000539843 H3BVH4 76 aa10.23□□□□□ -0.77
UBE3B-211ENST00000539843 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-211ENST00000539843 TPT1P13693 172 aaKnown RBP10.23□□□□□ -0.77
UBE3B-211ENST00000539843 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
UBE3B-211ENST00000539843 FMC1Q96HJ9 113 aa10.23□□□□□ -0.77
UBE3B-211ENST00000539843 LINC00479Q96M42 142 aa10.23□□□□□ -0.77
UBE3B-211ENST00000539843 C1QBP02746 253 aa10.22□□□□□ -0.77
UBE3B-211ENST00000539843 FAM74A4Q5TZK3 123 aa10.22□□□□□ -0.77
UBE3B-211ENST00000539843 MAP1LC3B2A6NCE7 125 aa10.21□□□□□ -0.77
UBE3B-211ENST00000539843 FAM74A7A6NL05 159 aa10.21□□□□□ -0.77
UBE3B-211ENST00000539843 M0R036 132 aa10.21□□□□□ -0.77
UBE3B-211ENST00000539843 ELOBQ15370 118 aa10.21□□□□□ -0.77
UBE3B-211ENST00000539843 ZFP82Q8N141 532 aa10.21□□□□□ -0.77
UBE3B-211ENST00000539843 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.21□□□□□ -0.77
UBE3B-211ENST00000539843 MAP1LC3BQ9GZQ8 125 aa10.21□□□□□ -0.77
UBE3B-211ENST00000539843 RNF222A6NCQ9 220 aa10.2□□□□□ -0.78
UBE3B-211ENST00000539843 ARMS2P0C7Q2 107 aa10.2□□□□□ -0.78
UBE3B-211ENST00000539843 CST9LP1Q5W188 147 aa10.2□□□□□ -0.78
UBE3B-211ENST00000539843 A0A087WX48 190 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 KRBOX1C9JBD0 128 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 M0R381 172 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 SH2D1AO60880 128 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 AKR1C3P42330 323 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 ZNF726P1Q15940 193 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 Q5BKY6 102 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 DNLZQ5SXM8 178 aa10.19□□□□□ -0.78
UBE3B-211ENST00000539843 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms