RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CRYGDP07320 174 aa12.91□□□□□ -0.34
TNFRSF1A-212ENST00000539372 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
TNFRSF1A-212ENST00000539372 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
TNFRSF1A-212ENST00000539372 FABP5P3A8MUU1 101 aa12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 EREGO14944 169 aa12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 S100A4P26447 101 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 FHITP49789 147 aa12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 RHOHQ15669 191 aa12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 HIST1H2BAQ96A08 127 aa12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 PTH2Q96A98 100 aa12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 NKX6-2Q9C056 277 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1A-212ENST00000539372 TRBV6-4A0A1B0GX49 114 aa12.89□□□□□ -0.35
TNFRSF1A-212ENST00000539372 CIDEAO60543 219 aa12.89□□□□□ -0.35
TNFRSF1A-212ENST00000539372 ASIPP42127 132 aa12.89□□□□□ -0.35
TNFRSF1A-212ENST00000539372 TIRAPP58753 221 aa12.89□□□□□ -0.35
TNFRSF1A-212ENST00000539372 ZC2HC1AQ96GY0 325 aa12.89□□□□□ -0.35
TNFRSF1A-212ENST00000539372 B4DEV8 164 aa12.88□□□□□ -0.35
TNFRSF1A-212ENST00000539372 K7EP13 123 aa12.88□□□□□ -0.35
TNFRSF1A-212ENST00000539372 LGALSLQ3ZCW2 172 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-212ENST00000539372 CST9LP1Q5W188 147 aa12.88□□□□□ -0.35
TNFRSF1A-212ENST00000539372 Q6ZSN1 163 aa12.88□□□□□ -0.35
TNFRSF1A-212ENST00000539372 A0A087WTM6 91 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 IGHV3-38A0A0C4DH36 116 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 H3BVH4 76 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 M0R036 132 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 SH2D1AO60880 128 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 MGST1P10620 155 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 CRIP1P50238 77 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 C10orf126Q8N4M7 172 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 PARLQ9H300 379 aa12.87□□□□□ -0.35
TNFRSF1A-212ENST00000539372 DNAH5Q8TE73 4624 aa12.86□□□□□ -0.35
TNFRSF1A-212ENST00000539372 TRAV8-6A0A0B4J262 113 aa12.86□□□□□ -0.35
TNFRSF1A-212ENST00000539372 UBE2G1P62253 170 aa12.86□□□□□ -0.35
TNFRSF1A-212ENST00000539372 OR11H4Q8NGC9 324 aa12.86□□□□□ -0.35
TNFRSF1A-212ENST00000539372 FMC1Q96HJ9 113 aa12.86□□□□□ -0.35
TNFRSF1A-212ENST00000539372 JPT2Q9H910 190 aa12.86□□□□□ -0.35
TNFRSF1A-212ENST00000539372 PGPEP1Q9NXJ5 209 aa12.86□□□□□ -0.35
TNFRSF1A-212ENST00000539372 APOBP04114 4563 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 A0A1B0GV50 99 aa12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 A8MWV9 139 aa12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 KRBOX1C9JBD0 128 aa12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 ZNF345Q14585 488 aa12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 FAM162BQ5T6X4 162 aa12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 IL36BQ9NZH7 164 aa12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 ZFP30Q9Y2G7 519 aa12.85□□□□□ -0.35
TNFRSF1A-212ENST00000539372 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 PAGE4O60829 102 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 FAM213BQ8TBF2 198 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 SAMD10Q9BYL1 202 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
TNFRSF1A-212ENST00000539372 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 GAGE12JA6NER3 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 IGHV3-33P01772 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 ARMS2P0C7Q2 107 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 AKR1C3P42330 323 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 GAGE1Q13065 139 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 GAGE4Q13068 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 GAGE5Q13069 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 GAGE13Q4V321 117 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 LELP1Q5T871 98 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 ZFP2Q6ZN57 461 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 SFT2D1Q8WV19 159 aa12.83□□□□□ -0.36
TNFRSF1A-212ENST00000539372 LTAP01374 205 aa12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 PIK3CD-AS1Q5SR53 167 aa12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 Q8N1X5 172 aa12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 TCEAL7Q9BRU2 100 aa12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 ZNF471Q9BX82 626 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 Q9UF83 564 aa12.82□□□□□ -0.36
TNFRSF1A-212ENST00000539372 ABCA13Q86UQ4 5058 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 TRBV6-1A0A0K0K1D8 114 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 HMSDA8MTL9 139 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 SEC11BP0C7V7 166 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 ZNF674Q2M3X9 581 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 DNLZQ5SXM8 178 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 SYT8Q8NBV8 401 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 Q9HAA7 133 aa12.81□□□□□ -0.36
TNFRSF1A-212ENST00000539372 A0A0D9SG52 128 aa12.8□□□□□ -0.36
TNFRSF1A-212ENST00000539372 IBA57-AS1B1ANH7 110 aa12.8□□□□□ -0.36
TNFRSF1A-212ENST00000539372 BCL2L11O43521 198 aa12.8□□□□□ -0.36
TNFRSF1A-212ENST00000539372 PSCAO43653 123 aa12.8□□□□□ -0.36
TNFRSF1A-212ENST00000539372 FAM74A4Q5TZK3 123 aa12.8□□□□□ -0.36
TNFRSF1A-212ENST00000539372 MBD3L1Q8WWY6 194 aa12.8□□□□□ -0.36
TNFRSF1A-212ENST00000539372 UMAD1C9J7I0 102 aa12.79□□□□□ -0.36
TNFRSF1A-212ENST00000539372 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
TNFRSF1A-212ENST00000539372 LINC01559Q495D7 138 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms