RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 IFI27L1Q96BM0 104 aa0.36□□□□□ -2.35
CCDC7-209ENST00000539197 ASH1LQ9NR48 2969 aaKnown RBP0.36□□□□□ -2.35
CCDC7-209ENST00000539197 ZDBF2Q9HCK1 2354 aa0.36□□□□□ -2.35
CCDC7-209ENST00000539197 J3QLW9 94 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 YPEL1O60688 119 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 MPC1LP0DKB6 136 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 MIC13Q5XKP0 118 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 TSTD1Q8NFU3 115 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 TMEM141Q96I45 108 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 TMEM14BQ9NUH8 114 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 KDM5CP41229 1560 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 CCDC171Q6TFL3 1326 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 ERCC6Q03468 1493 aa0.35□□□□□ -2.35
CCDC7-209ENST00000539197 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
CCDC7-209ENST00000539197 KIDINS220Q9ULH0 1771 aa0.34□□□□□ -2.35
CCDC7-209ENST00000539197 KIAA1549LQ6ZVL6 1849 aa0.34□□□□□ -2.35
CCDC7-209ENST00000539197 TRAV2A0A0B4J234 112 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 OVOS2A0A0J9YW53 1432 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 DISP2A7MBM2 1401 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 J3QR89 54 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 K7ERU9 68 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 PITX3O75364 302 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 APOC1P02654 83 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 PRH1P02810 166 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 TSPAN19P0C672 248 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 ELOF1P60002 83 aaKnown RBP0.34□□□□□ -2.36
CCDC7-209ENST00000539197 SMIM21Q3B7S5 101 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 LINC01545Q5VT33 79 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 OVOS2Q6IE36 1432 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 OR2T2Q6IF00 324 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 CTAGE3PQ8IX95 158 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 TSKUQ8WUA8 353 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 ANP32BQ92688 251 aaKnown RBP0.34□□□□□ -2.36
CCDC7-209ENST00000539197 VPS25Q9BRG1 176 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 COPZ2Q9P299 210 aa0.34□□□□□ -2.36
CCDC7-209ENST00000539197 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.34□□□□□ -2.36
CCDC7-209ENST00000539197 XIRP1Q702N8 1843 aaKnown RBP0.34□□□□□ -2.36
CCDC7-209ENST00000539197 NAV2Q8IVL1 2488 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 ANK1P16157 1881 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 A0A096LNT2 108 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 TEX49A0A1B0GTD5 131 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 TCRBV3S1A0A5B6 114 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 ZNF670-ZNF695F2Z2N8 137 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 KRTAP2-3P0C7H8 128 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 PYYP10082 97 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 NPC2P61916 151 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 SMCO1Q147U7 214 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 KRTAP2-4Q9BYR9 128 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 KRTAP2-1Q9BYU5 128 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 NDUFA12Q9UI09 145 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 APCP25054 2843 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 UHRF1BP1LA0JNW5 1464 aa0.33□□□□□ -2.36
CCDC7-209ENST00000539197 SPTBP11277 2137 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 BLMP54132 1417 aaPredicted RBP0.32□□□□□ -2.36
CCDC7-209ENST00000539197 MEGF8Q7Z7M0 2845 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 PIRTP0C851 137 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 COX4I1P13073 169 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 EMX2Q04743 252 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 SAR1AQ9NR31 198 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 COA4Q9NYJ1 87 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 BET1LQ9NYM9 111 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 PLAC8Q9NZF1 115 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 ERG28Q9UKR5 140 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 PTPRMP28827 1452 aa0.32□□□□□ -2.36
CCDC7-209ENST00000539197 PRG4Q92954 1404 aaPredicted RBP0.31□□□□□ -2.36
CCDC7-209ENST00000539197 TRAV12-3A0A0B4J271 114 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 CCDC179H3BU77 68 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 NPFFO15130 113 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 RPS25P62851 125 aaKnown RBP0.31□□□□□ -2.36
CCDC7-209ENST00000539197 CYP2G1PQ6ZSU1 146 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 Q6ZUT4 128 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 NDUFA11Q86Y39 141 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 VSTM2AQ8TAG5 236 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 DSCR8Q96T75 97 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 SMR3AQ99954 134 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 TPT1P8Q9HAU6 139 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 KNTC1P50748 2209 aa0.31□□□□□ -2.36
CCDC7-209ENST00000539197 HELZP42694 1942 aaKnown RBP0.3□□□□□ -2.36
CCDC7-209ENST00000539197 FHAD1B1AJZ9 1412 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 SOGA1O94964 1423 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 UNC13AQ9UPW8 1703 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 A0A087WTM6 91 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 NCR2O95944 276 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 COPZ1P61923 177 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 SPCS2Q15005 226 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 C20orf197Q8N268 126 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 PPP1R1CQ8WVI7 109 aa0.3□□□□□ -2.36
CCDC7-209ENST00000539197 PSMG3Q9BT73 122 aaPredicted RBP0.3□□□□□ -2.36
CCDC7-209ENST00000539197 TRPM7Q96QT4 1865 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 TRAV12-2A0A075B6T6 113 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 CCL3L1P16619 93 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 RRAS2P62070 204 aaPredicted RBP0.29□□□□□ -2.36
CCDC7-209ENST00000539197 UBE2G1P62253 170 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 C9orf116Q5BN46 136 aaPredicted RBP0.29□□□□□ -2.36
CCDC7-209ENST00000539197 SPANXN1Q5VSR9 72 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 C4orf33Q8N1A6 199 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 SDF2Q99470 211 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 NAV3Q8IVL0 2385 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 LOC285556D6RIA3 1793 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms