RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 GAGE12GP0CL81 117 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE12IP0CL82 117 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE4Q13068 117 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 Q6Q795 121 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 C9orf139Q6ZV77 190 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 ARRDC1-AS1Q9H2J1 176 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 SFTA2Q6UW10 78 aa6.9□□□□□ -1.31
SNHG1-209ENST00000538654 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.31
SNHG1-209ENST00000538654 RNASE6Q93091 150 aaKnown RBP6.9□□□□□ -1.31
SNHG1-209ENST00000538654 PLEKHB2Q96CS7 222 aa6.9□□□□□ -1.31
SNHG1-209ENST00000538654 KLK15Q9H2R5 256 aa6.9□□□□□ -1.31
SNHG1-209ENST00000538654 DYNLRB1Q9NP97 96 aa6.9□□□□□ -1.31
SNHG1-209ENST00000538654 A0A0J9YY99 117 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 M0R381 172 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 CTSGP08311 255 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
SNHG1-209ENST00000538654 NDUFV3P56181 108 aaKnown RBP6.89□□□□□ -1.31
SNHG1-209ENST00000538654 C19orf54Q5BKX5 351 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 C22orf34Q6ZV56 151 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 SLC25A20O43772 301 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 RASL10AQ92737 203 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 AGPAT4-IT1Q9H0P7 198 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 C11orf21Q9P2W6 132 aa6.89□□□□□ -1.31
SNHG1-209ENST00000538654 TRAV8-2A0A0B4J237 113 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 IGHV1-69DA0A0B4J2H0 117 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 CFC1BP0CG36 223 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 CFC1P0CG37 223 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 IFITM1P13164 125 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 BSPH1Q075Z2 132 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 IGHV3-30P01768 117 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 IGHV3-30-5P0DP03 117 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 DPH3P1Q9H4G8 78 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 DPM3Q9P2X0 92 aa6.88□□□□□ -1.31
SNHG1-209ENST00000538654 NHLRC4P0CG21 123 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-209ENST00000538654 DLX1P56177 255 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 C9orf47Q6ZRZ4 202 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 KIR2DL4Q99706 377 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 ZGRF1Q86YA3 2104 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 BUB3O43684 328 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 RNF182Q8N6D2 247 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 LENEPQ9Y5L5 61 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 VPS13AQ96RL7 3174 aa6.87□□□□□ -1.31
SNHG1-209ENST00000538654 C9JAW5 83 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 NDUFA7O95182 113 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 P0DMU3 169 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 FAM231AP0DMU4 169 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 FAM231CP0DMU5 169 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 PIP4P1Q86T03 277 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 KLHL30-AS1Q8NEE0 82 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 LINC01600Q96MT4 127 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 CELSR3Q9NYQ7 3312 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 F5H697 171 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 IGHV3-23P01764 117 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 PRB3Q04118 309 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-209ENST00000538654 HES1Q14469 280 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 LINC01548A6NM66 108 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 GYPEP15421 78 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
SNHG1-209ENST00000538654 PMVKQ15126 192 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
SNHG1-209ENST00000538654 PRTN3P24158 256 aa6.85□□□□□ -1.31
SNHG1-209ENST00000538654 TCF15Q12870 199 aa6.85□□□□□ -1.31
SNHG1-209ENST00000538654 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
SNHG1-209ENST00000538654 FAM19A1Q7Z5A9 133 aa6.85□□□□□ -1.31
SNHG1-209ENST00000538654 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
SNHG1-209ENST00000538654 IGLV4-69A0A075B6H9 119 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-209ENST00000538654 TRAV8-4A0A0B4J246 113 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 CDX4O14627 284 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-209ENST00000538654 LGALS3P17931 250 aaKnown RBP6.84□□□□□ -1.31
SNHG1-209ENST00000538654 PRR30Q53SZ7 412 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-209ENST00000538654 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 OR10J6PQ8NGY7 276 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 FAM57AQ8TBR7 257 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 Q9H8V8 135 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 TECTAO75443 2155 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 DSPP15924 2871 aaKnown RBP6.84□□□□□ -1.31
SNHG1-209ENST00000538654 TRAV4A0A0B4J268 109 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 CRYGDP07320 174 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 S100A4P26447 101 aaKnown RBP6.84□□□□□ -1.31
SNHG1-209ENST00000538654 DEFB109BQ30KR1 87 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 IGFL3Q6UXB1 125 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
SNHG1-209ENST00000538654 PHLDA3Q9Y5J5 127 aa6.84□□□□□ -1.31
SNHG1-209ENST00000538654 IGHV3-33P01772 117 aa6.83□□□□□ -1.32
SNHG1-209ENST00000538654 LY6G5BQ8NDX9 201 aa6.83□□□□□ -1.32
SNHG1-209ENST00000538654 TIMM17AQ99595 171 aa6.83□□□□□ -1.32
SNHG1-209ENST00000538654 PRRC2CQ9Y520 2896 aaKnown RBP6.83□□□□□ -1.32
SNHG1-209ENST00000538654 TRAV21A0A0B4J279 112 aa6.83□□□□□ -1.32
SNHG1-209ENST00000538654 J3QQQ9 107 aa6.83□□□□□ -1.32
SNHG1-209ENST00000538654 MGPP08493 103 aa6.83□□□□□ -1.32
SNHG1-209ENST00000538654 KLRB1Q12918 225 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms