RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 HIGD2BQ4VC39 106 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 SCN5AQ14524 2016 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 CACNA1IQ9P0X4 2223 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 NDUFS5O43920 106 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 PROP1O75360 226 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 UBE2BP63146 152 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 BPESC1Q9GZL8 116 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 U3KQE9 123 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 A0A0J9YXY3 114 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 ETDCA0A1B0GVM5 59 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 G3V318 75 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 RBX1P62877 108 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 PATE2Q6UY27 113 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 FANCMQ8IYD8 2048 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 FNDC1Q4ZHG4 1894 aaPredicted RBP5.38□□□□□ -1.55
SORT1-209ENST00000538502 VWA8A3KMH1 1905 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 YPEL4Q96NS1 127 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 DOCK3Q8IZD9 2030 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 GATA1P15976 413 aaPredicted RBP5.38□□□□□ -1.55
SORT1-209ENST00000538502 HOXB4P17483 251 aaPredicted RBP5.38□□□□□ -1.55
SORT1-209ENST00000538502 RNF138Q8WVD3 245 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 A0A0J9YXV3 536 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 TRBV12-3P01733 135 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 UPK3BQ9BT76 320 aa5.38□□□□□ -1.55
SORT1-209ENST00000538502 RS1O15537 224 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 Q6Q795 121 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 C11orf53Q8IXP5 236 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 K7EIM0 57 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 K7EMT4 169 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 MT-ATP8P03928 68 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 TRBV30A0A0K0K1B3 111 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 TMEM89A2RUT3 159 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 CFHR3Q02985 330 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 TMEM105Q8N8V8 129 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 DIRC1Q969H9 104 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
SORT1-209ENST00000538502 RUSC1-AS1Q66K80 236 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 HEATR1Q9H583 2144 aaKnown RBP5.37□□□□□ -1.55
SORT1-209ENST00000538502 ALPK2Q86TB3 2170 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 XCL1P47992 114 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 C10orf105Q8TEF2 133 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 CLEC2BQ92478 149 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 DOCK11Q5JSL3 2073 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 ZNF503-AS2A6NEH8 195 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
SORT1-209ENST00000538502 HIST2H2BCQ6DN03 193 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 HIST2H2BDQ6DRA6 164 aa5.37□□□□□ -1.55
SORT1-209ENST00000538502 WDR81Q562E7 1941 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 NDUFA7O95182 113 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 YLPM1P49750 1951 aaKnown RBP5.36□□□□□ -1.55
SORT1-209ENST00000538502 TEX22C9J3V5 150 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 LECT2O14960 151 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 AHCTF1Q8WYP5 2266 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 H7C423 109 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 BUB3O43684 328 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 FGF23Q9GZV9 251 aaPredicted RBP5.36□□□□□ -1.55
SORT1-209ENST00000538502 ASPHD1Q5U4P2 390 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 ODF3Q96PU9 254 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 RTTNQ86VV8 2226 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 TRBV7-3A0A075B6L6 115 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 IGLC6P0CF74 106 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 SEC61GP60059 68 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 U3KQK5 164 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 FER1L5A0AVI2 2057 aa5.36□□□□□ -1.55
SORT1-209ENST00000538502 RLFQ13129 1914 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 NFE4Q86UQ8 179 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 PTH2Q96A98 100 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 DOCK9Q9BZ29 2069 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 LYRM9A8MSI8 78 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 ZNF503Q96F45 646 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 IGKV1-17P01599 117 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 C20orf173Q96LM9 149 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 NDUFA1O15239 70 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 C20orf203Q8NBC4 194 aa5.35□□□□□ -1.55
SORT1-209ENST00000538502 DIAPH2-AS1Q14236 149 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 DEFB105AQ8NG35 78 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 NOP10Q9NPE3 64 aaKnown RBP5.34□□□□□ -1.55
SORT1-209ENST00000538502 THADAQ6YHU6 1953 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 IGLV2-23P01705 113 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 SERP2Q8N6R1 65 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 TANC1Q9C0D5 1861 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 TIMM17BO60830 172 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 IGLV2-14P01704 120 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 IGHV3-30-3P0DP02 117 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 THSD7BQ9C0I4 1608 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 TRBV10-1A0A0K0K1A3 114 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 CTSGP08311 255 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 CAMK2N2Q96S95 79 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 TP73-AS1Q9UF72 201 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 P0C879 139 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 ZNF524Q96C55 264 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 MSRB1Q9NZV6 116 aa5.34□□□□□ -1.55
SORT1-209ENST00000538502 APC2O95996 2303 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 OBSL1O75147 1896 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 ABCA7Q8IZY2 2146 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 CENPVL3A0A0U1RRI6 287 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 IGLV2-8P01709 118 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 COX7BP24311 80 aa5.33□□□□□ -1.56
SORT1-209ENST00000538502 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms