RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 COL5A1-AS1Q5SY13 56 aa6.95□□□□□ -1.3
PTPRR-205ENST00000537619 SLC25A34Q6PIV7 304 aa6.95□□□□□ -1.3
PTPRR-205ENST00000537619 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
PTPRR-205ENST00000537619 Q6ZVH6 145 aa6.95□□□□□ -1.3
PTPRR-205ENST00000537619 UBE2E2Q96LR5 201 aa6.95□□□□□ -1.3
PTPRR-205ENST00000537619 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
PTPRR-205ENST00000537619 TEX15Q9BXT5 2789 aa6.94□□□□□ -1.3
PTPRR-205ENST00000537619 CREBBPQ92793 2442 aa6.94□□□□□ -1.3
PTPRR-205ENST00000537619 ZNF25P17030 456 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-205ENST00000537619 SLURP1P55000 103 aa6.94□□□□□ -1.3
PTPRR-205ENST00000537619 TCTEX1D4Q5JR98 221 aa6.94□□□□□ -1.3
PTPRR-205ENST00000537619 C14orf178Q8N769 122 aaPredicted RBP6.94□□□□□ -1.3
PTPRR-205ENST00000537619 WFDC11Q8NEX6 87 aa6.94□□□□□ -1.3
PTPRR-205ENST00000537619 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
PTPRR-205ENST00000537619 MRAP2Q96G30 205 aa6.94□□□□□ -1.3
PTPRR-205ENST00000537619 MUC4Q99102 2169 aa6.94□□□□□ -1.3
PTPRR-205ENST00000537619 TRAV12-3A0A0B4J271 114 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 IGKV3-20P01619 116 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 COX8AP10176 69 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 TCTAP57738 103 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 LINC00315P59091 139 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 SNRPD3P62318 126 aaKnown RBP6.93□□□□□ -1.3
PTPRR-205ENST00000537619 ODF1Q14990 250 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 TMEM86BQ8N661 226 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 JPT2Q9H910 190 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 PHLDA3Q9Y5J5 127 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 TRAV12-2A0A075B6T6 113 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 MPV17L2Q567V2 206 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 SMIM2Q9BVW6 85 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 DPH3P1Q9H4G8 78 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
PTPRR-205ENST00000537619 C7orf71A4D174 169 aa6.92□□□□□ -1.3
PTPRR-205ENST00000537619 POM121L12Q8N7R1 296 aa6.92□□□□□ -1.3
PTPRR-205ENST00000537619 DUX3Q96PT4 197 aa6.92□□□□□ -1.3
PTPRR-205ENST00000537619 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
PTPRR-205ENST00000537619 ZMAT4Q9H898 229 aa6.92□□□□□ -1.3
PTPRR-205ENST00000537619 MGPP08493 103 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 SMIM17P0DL12 118 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 GAGE1Q13065 139 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 LAGE3Q14657 143 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 BVES-AS1Q5T3Y7 98 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 AMTNQ6UX39 209 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 DPF1Q92782 380 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 AGRNO00468 2067 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 IGHV3-16A0A0C4DH30 117 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 DLEU1O43261 78 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 DUSP14O95147 198 aaKnown RBP6.91□□□□□ -1.3
PTPRR-205ENST00000537619 NPSP0C0P6 89 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 KRTAP1-1Q07627 177 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 SPINK13Q1W4C9 94 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 AP1S3Q96PC3 154 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 FOXC2Q99958 501 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 ITPR3Q14573 2671 aa6.91□□□□□ -1.3
PTPRR-205ENST00000537619 ANK3Q12955 4377 aaKnown RBP6.9□□□□□ -1.3
PTPRR-205ENST00000537619 J3QKU1 62 aa6.9□□□□□ -1.3
PTPRR-205ENST00000537619 NUDT3O95989 172 aa6.9□□□□□ -1.3
PTPRR-205ENST00000537619 CD7P09564 240 aa6.9□□□□□ -1.3
PTPRR-205ENST00000537619 RBMY1A1P0DJD3 496 aaKnown RBP6.9□□□□□ -1.3
PTPRR-205ENST00000537619 RBMY1CP0DJD4 496 aa6.9□□□□□ -1.3
PTPRR-205ENST00000537619 SUMO2P61956 95 aaKnown RBP6.9□□□□□ -1.3
PTPRR-205ENST00000537619 RBMY1FQ15415 496 aaKnown RBP6.9□□□□□ -1.3
PTPRR-205ENST00000537619 FAM159AQ6UWV7 190 aa6.9□□□□□ -1.3
PTPRR-205ENST00000537619 C9orf85Q96MD7 179 aa6.9□□□□□ -1.3
PTPRR-205ENST00000537619 MDFICQ9P1T7 246 aa6.9□□□□□ -1.3
PTPRR-205ENST00000537619 IGKV2D-26A0A0A0MRZ7 120 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 KNCNA6PVL3 124 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 LINC01619G3V211 115 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 Q6ZSV7 163 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 NEGR1Q7Z3B1 354 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 PCP2Q8IVA1 136 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 OR1N2Q8NGR9 330 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 ESM1Q9NQ30 184 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 PEMTQ9UBM1 199 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 HHLA3Q9XRX5 114 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 CUBNO60494 3623 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 A0A087WWL8 130 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 RBMY1BA6NDE4 496 aaKnown RBP6.89□□□□□ -1.31
PTPRR-205ENST00000537619 RBMY1EA6NEQ0 496 aaKnown RBP6.89□□□□□ -1.31
PTPRR-205ENST00000537619 DNAJC9-AS1A6NH13 148 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 PPP1R17O96001 155 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 PRSS1P07477 247 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 RBMY1DP0C7P1 496 aaKnown RBP6.89□□□□□ -1.31
PTPRR-205ENST00000537619 Q8N1Y9 231 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 OR11H1Q8NG94 326 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 C4orf3Q8WVX3 66 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 C20orf78Q9BR46 151 aa6.89□□□□□ -1.31
PTPRR-205ENST00000537619 PLA2G2AP14555 144 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 CDKN1BP46527 198 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 SUMO4Q6EEV6 95 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 FOXI2Q6ZQN5 318 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 DLX4Q92988 240 aaPredicted RBP6.88□□□□□ -1.31
PTPRR-205ENST00000537619 TTTY13Q9BZ97 58 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 MRPL35Q9NZE8 188 aaKnown RBP6.88□□□□□ -1.31
PTPRR-205ENST00000537619 PDZD2O15018 2839 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 TLN2Q9Y4G6 2542 aa6.88□□□□□ -1.31
PTPRR-205ENST00000537619 IGHV1OR15-1A0A075B7D0 117 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms