RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
SMG6-203ENST00000536871 A0A096LNJ9 63 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 SRD5A1P18405 259 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 AMMECR1LQ6DCA0 310 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 UFSP1Q6NVU6 142 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 WFDC11Q8NEX6 87 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 IFI27L1Q96BM0 104 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 ANKRD17O75179 2603 aaKnown RBP10.17□□□□□ -0.78
SMG6-203ENST00000536871 J3KRW8 73 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 TCTEX1D4Q5JR98 221 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 ATOH7Q8N100 152 aa10.17□□□□□ -0.78
SMG6-203ENST00000536871 LINC01549A6NIU2 74 aa10.16□□□□□ -0.78
SMG6-203ENST00000536871 ATP5LO75964 103 aa10.16□□□□□ -0.78
SMG6-203ENST00000536871 NUDT3O95989 172 aa10.16□□□□□ -0.78
SMG6-203ENST00000536871 NRACQ8N912 160 aa10.16□□□□□ -0.78
SMG6-203ENST00000536871 NEGR1Q7Z3B1 354 aa10.15□□□□□ -0.78
SMG6-203ENST00000536871 POM121L12Q8N7R1 296 aa10.15□□□□□ -0.78
SMG6-203ENST00000536871 OR5A1Q8NGJ0 315 aa10.15□□□□□ -0.78
SMG6-203ENST00000536871 OR9G4Q8NGQ1 327 aa10.15□□□□□ -0.78
SMG6-203ENST00000536871 OR1N2Q8NGR9 330 aa10.15□□□□□ -0.78
SMG6-203ENST00000536871 IGLV2-18A0A075B6J9 118 aa10.15□□□□□ -0.79
SMG6-203ENST00000536871 A0A1B0GV72 72 aa10.15□□□□□ -0.79
SMG6-203ENST00000536871 RNASE3P12724 160 aaKnown RBP10.15□□□□□ -0.79
SMG6-203ENST00000536871 LAGE3Q14657 143 aa10.15□□□□□ -0.79
SMG6-203ENST00000536871 ORMDL2Q53FV1 153 aa10.15□□□□□ -0.79
SMG6-203ENST00000536871 SYT8Q8NBV8 401 aa10.15□□□□□ -0.79
SMG6-203ENST00000536871 TIMM8BQ9Y5J9 83 aaPredicted RBP10.15□□□□□ -0.79
SMG6-203ENST00000536871 LRRK2Q5S007 2527 aa10.14□□□□□ -0.79
SMG6-203ENST00000536871 GAGE10A6NGK3 116 aa10.14□□□□□ -0.79
SMG6-203ENST00000536871 EDN2P20800 178 aa10.14□□□□□ -0.79
SMG6-203ENST00000536871 RPL32P62910 135 aaKnown RBP10.14□□□□□ -0.79
SMG6-203ENST00000536871 Q6ZSV7 163 aa10.14□□□□□ -0.79
SMG6-203ENST00000536871 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
SMG6-203ENST00000536871 ZFYVE26Q68DK2 2539 aa10.14□□□□□ -0.79
SMG6-203ENST00000536871 ASH1LQ9NR48 2969 aaKnown RBP10.14□□□□□ -0.79
SMG6-203ENST00000536871 TRAV25A0A0B4J276 109 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 DNAJC9-AS1A6NH13 148 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 DEFB1P60022 68 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 TMEM160Q9NX00 188 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 CSPG4Q6UVK1 2322 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 NAV2Q8IVL1 2488 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 TRGV11A0A075B6L2 103 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 A8MTW9 85 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 H3BRM9 83 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 Q6ZQT7 251 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
SMG6-203ENST00000536871 IGHV1OR15-1A0A075B7D0 117 aa10.12□□□□□ -0.79
SMG6-203ENST00000536871 A6NDN8 102 aa10.12□□□□□ -0.79
SMG6-203ENST00000536871 GNRH2O43555 120 aa10.12□□□□□ -0.79
SMG6-203ENST00000536871 CD7P09564 240 aa10.12□□□□□ -0.79
SMG6-203ENST00000536871 SUMO2P61956 95 aaKnown RBP10.12□□□□□ -0.79
SMG6-203ENST00000536871 KIR3DS1Q14943 382 aa10.12□□□□□ -0.79
SMG6-203ENST00000536871 DYNLRB2Q8TF09 96 aa10.12□□□□□ -0.79
SMG6-203ENST00000536871 DUX5Q96PT3 197 aa10.12□□□□□ -0.79
SMG6-203ENST00000536871 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 TRAV12-3A0A0B4J271 114 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 H0Y8G0 127 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 K7EP34 96 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 SLURP1P55000 103 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 KLHL30-AS1Q8NEE0 82 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 C9orf85Q96MD7 179 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 C16orf95Q9H693 158 aa10.11□□□□□ -0.79
SMG6-203ENST00000536871 C9orf118A6NHY6 69 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 RNASE1P07998 156 aaKnown RBP10.1□□□□□ -0.79
SMG6-203ENST00000536871 HLA-DRB4P13762 266 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 C14orf178Q8N769 122 aaPredicted RBP10.1□□□□□ -0.79
SMG6-203ENST00000536871 TMEM158Q8WZ71 300 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 SPAG8Q99932 426 aaPredicted RBP10.1□□□□□ -0.79
SMG6-203ENST00000536871 HLA-DRB4X5D2U9 266 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 PTPN13Q12923 2485 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 FBN2P35556 2912 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 ADAMTSL5Q6ZMM2 481 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 CLUHP3Q96NS8 147 aa10.1□□□□□ -0.79
SMG6-203ENST00000536871 IGHV3-16A0A0C4DH30 117 aa10.09□□□□□ -0.79
SMG6-203ENST00000536871 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
SMG6-203ENST00000536871 COX8AP10176 69 aa10.09□□□□□ -0.79
SMG6-203ENST00000536871 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
SMG6-203ENST00000536871 AMTNQ6UX39 209 aa10.09□□□□□ -0.79
SMG6-203ENST00000536871 YAE1D1Q9NRH1 226 aa10.09□□□□□ -0.79
SMG6-203ENST00000536871 USP9YO00507 2555 aaPredicted RBP10.09□□□□□ -0.79
SMG6-203ENST00000536871 CREBBPQ92793 2442 aa10.09□□□□□ -0.79
SMG6-203ENST00000536871 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 MGPP08493 103 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 RIPPLY3P57055 190 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 ZNF418Q8TF45 676 aaPredicted RBP10.08□□□□□ -0.8
SMG6-203ENST00000536871 RASL10AQ92737 203 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 TRAV26-2A0A0B4J265 109 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 SIVA1O15304 175 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 SAP30O75446 220 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 PRSS1P07477 247 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
SMG6-203ENST00000536871 FHL3Q13643 280 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 DEFB136Q30KP8 78 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 JMJD8Q96S16 334 aa10.08□□□□□ -0.8
SMG6-203ENST00000536871 KIF25-AS1Q9Y6Z4 181 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms