RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
RFX4-204ENST00000536688 ZNRD1Q9P1U0 126 aa7.76□□□□□ -1.17
RFX4-204ENST00000536688 RNF7Q9UBF6 113 aa7.76□□□□□ -1.17
RFX4-204ENST00000536688 SVILO95425 2214 aa7.75□□□□□ -1.17
RFX4-204ENST00000536688 IGHV3-21A0A0B4J1V1 117 aa7.75□□□□□ -1.17
RFX4-204ENST00000536688 Q5XG85 94 aa7.75□□□□□ -1.17
RFX4-204ENST00000536688 MUSTN1Q8IVN3 82 aa7.75□□□□□ -1.17
RFX4-204ENST00000536688 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
RFX4-204ENST00000536688 RAI1Q7Z5J4 1906 aaPredicted RBP7.75□□□□□ -1.17
RFX4-204ENST00000536688 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 DUX4L9Q6RFH8 374 aaPredicted RBP7.74□□□□□ -1.17
RFX4-204ENST00000536688 Q8TAT8 98 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 KLK15Q9H2R5 256 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 PRO0628Q9UI54 55 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 SDK1Q7Z5N4 2213 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 IGIPA6NJ69 53 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 K7EIM0 57 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 MALP21145 153 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 DLX1P56177 255 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 SPINK14Q6IE38 97 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 DCANP1Q8TF63 244 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 CFHR4Q92496 578 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 DYNLRB1Q9NP97 96 aa7.74□□□□□ -1.17
RFX4-204ENST00000536688 H7C2G1 150 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 LYZL6O75951 148 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 CCL8P80075 99 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 ZNF876PQ49A33 203 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 SPANXN1Q5VSR9 72 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 DAND5Q8N907 189 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 LY6G6EA0A0G2JKS1 128 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 NDUFC2-KCTD14E9PQ53 114 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 C14orf178Q8N769 122 aaPredicted RBP7.73□□□□□ -1.17
RFX4-204ENST00000536688 U3KQA8 63 aa7.73□□□□□ -1.17
RFX4-204ENST00000536688 CACNA1HO95180 2353 aa7.72□□□□□ -1.17
RFX4-204ENST00000536688 hADV29S1A0JD25 119 aa7.72□□□□□ -1.17
RFX4-204ENST00000536688 ZNF883P0CG24 379 aa7.72□□□□□ -1.17
RFX4-204ENST00000536688 LAMA1P25391 3075 aa7.72□□□□□ -1.17
RFX4-204ENST00000536688 RNF223E7ERA6 249 aa7.71□□□□□ -1.17
RFX4-204ENST00000536688 TSHBP01222 138 aa7.71□□□□□ -1.17
RFX4-204ENST00000536688 C4orf26Q17RF5 130 aa7.71□□□□□ -1.17
RFX4-204ENST00000536688 SERP2Q8N6R1 65 aa7.71□□□□□ -1.17
RFX4-204ENST00000536688 SMCR5Q8TEV8 140 aa7.71□□□□□ -1.17
RFX4-204ENST00000536688 DPH3P1Q9H4G8 78 aa7.71□□□□□ -1.17
RFX4-204ENST00000536688 MSRB2Q9Y3D2 182 aa7.71□□□□□ -1.17
RFX4-204ENST00000536688 NTN3O00634 580 aaPredicted RBP7.71□□□□□ -1.18
RFX4-204ENST00000536688 RPL18AQ02543 176 aaKnown RBP7.71□□□□□ -1.18
RFX4-204ENST00000536688 CCL13Q99616 98 aa7.71□□□□□ -1.18
RFX4-204ENST00000536688 RNF5Q99942 180 aa7.71□□□□□ -1.18
RFX4-204ENST00000536688 UPK3BQ9BT76 320 aa7.71□□□□□ -1.18
RFX4-204ENST00000536688 SPTBN4Q9H254 2564 aa7.71□□□□□ -1.18
RFX4-204ENST00000536688 DYNAPQ8N1N2 210 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 JPT2Q9H910 190 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 BEX4Q9NWD9 120 aaPredicted RBP7.7□□□□□ -1.18
RFX4-204ENST00000536688 VPS13AQ96RL7 3174 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 GPR179Q6PRD1 2367 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 MED14OSP0DP75 135 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 UBE2E1P51965 193 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 MRPL53Q96EL3 112 aaKnown RBP7.7□□□□□ -1.18
RFX4-204ENST00000536688 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 DNAJC13O75165 2243 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 SPEGQ15772 3267 aa7.7□□□□□ -1.18
RFX4-204ENST00000536688 MYO15AQ9UKN7 3530 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 TRAV13-1A0A0B4J241 112 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 IGHV1-18A0A0C4DH31 117 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 IGHV1-69P01742 117 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 TIMM21Q9BVV7 248 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 DMDP11532 3685 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 PLXNB1O43157 2135 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 CHD6Q8TD26 2715 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 IGLV3-9A0A075B6K5 115 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 IGHV4OR15-8A0A075B7B6 117 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 A0A087WW49 117 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 MBD3L4A6NDZ8 208 aaPredicted RBP7.69□□□□□ -1.18
RFX4-204ENST00000536688 MBD3L3A6NE82 208 aaPredicted RBP7.69□□□□□ -1.18
RFX4-204ENST00000536688 MBD3L5A6NJ08 208 aaPredicted RBP7.69□□□□□ -1.18
RFX4-204ENST00000536688 OXTP01178 125 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
RFX4-204ENST00000536688 SETXQ7Z333 2677 aaKnown RBP7.68□□□□□ -1.18
RFX4-204ENST00000536688 TRBV7-1A0A0A6YYK4 115 aa7.68□□□□□ -1.18
RFX4-204ENST00000536688 ENSAO43768 121 aaKnown RBP7.68□□□□□ -1.18
RFX4-204ENST00000536688 FAM222AQ5U5X8 452 aa7.68□□□□□ -1.18
RFX4-204ENST00000536688 TMEM200BQ69YZ2 307 aa7.68□□□□□ -1.18
RFX4-204ENST00000536688 TP53TG1Q9Y2A0 90 aa7.68□□□□□ -1.18
RFX4-204ENST00000536688 SMAD5-AS1Q9Y6J3 95 aa7.68□□□□□ -1.18
RFX4-204ENST00000536688 A0A0J9YXY3 114 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 INAFM2P0DMQ5 153 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 GFRALQ6UXV0 394 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 ASCL5Q7RTU5 278 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 LENEPQ9Y5L5 61 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 I3L3M4 83 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 PRB4P10163 310 aaPredicted RBP7.67□□□□□ -1.18
RFX4-204ENST00000536688 LPAL2Q16609 132 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 MSMPQ1L6U9 139 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 C3orf36Q3SXR2 165 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 FAM19A4Q96LR4 140 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 LITAFQ99732 161 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 HES7Q9BYE0 225 aa7.67□□□□□ -1.18
RFX4-204ENST00000536688 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms