RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 ERCC8Q13216 396 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 FAM104BQ5XKR9 115 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 IGFL2Q6UWQ7 119 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 C2orf82Q6UX34 121 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 MDP1Q86V88 176 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 VKORC1L1Q8N0U8 176 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 ORMDL3Q8N138 153 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 MAPKAPK5-AS1Q8N8E1 139 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 Q8N8P6 123 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 WFDC11Q8NEX6 87 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 FMC1Q96HJ9 113 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 PGLYRP4Q96LB8 373 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 DEFB118Q96PH6 123 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 SPACA5Q96QH8 159 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 METTL26Q96S19 204 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 NABP2Q9BQ15 211 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 PAXXQ9BUH6 204 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 DAZ1Q9NQZ3 744 aaKnown RBP1.83□□□□□ -2.12
SKA3-207ENST00000536239 DEPPQ9NTK1 212 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 ANAPC11Q9NYG5 84 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 LSM7Q9UK45 103 aaKnown RBP1.83□□□□□ -2.12
SKA3-207ENST00000536239 TIMM8BQ9Y5J9 83 aaPredicted RBP1.83□□□□□ -2.12
SKA3-207ENST00000536239 CACNA1CQ13936 2221 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 C2orf16Q68DN1 1984 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 TRIOBPQ9H2D6 2365 aa1.83□□□□□ -2.12
SKA3-207ENST00000536239 MYOFQ9NZM1 2061 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 TRBV7-1A0A0A6YYK4 115 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 TRAV12-1A0A0B4J245 112 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1D-13A0A0B4J2D9 117 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 IGHV1-58A0A0C4DH39 117 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 LOC101059948A0A1B0GTJ6 334 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 PLAC8L1A1L4L8 177 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 KRTAP4-16G5E9R7 235 aaPredicted RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 H3BTX0 84 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 M0R135 149 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 NDUFC1O43677 76 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1-39P01597 117 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1D-39P04432 117 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 COX6CP09669 75 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 P0C879 139 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1-13P0DP09 117 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 GP1BBP13224 206 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 MAGEA5P43359 124 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 DAZ2Q13117 558 aaKnown RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 ORMDL2Q53FV1 153 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 MIC13Q5XKP0 118 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 LINC00305Q7Z4B0 112 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 DAZ4Q86SG3 579 aaKnown RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 ZCCHC24Q8N2G6 241 aaKnown RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 SSMEM1Q8WWF3 244 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 SRSF12Q8WXF0 261 aaKnown RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 MRPL53Q96EL3 112 aaKnown RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 S1PR3Q99500 378 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 FOXC2Q99958 501 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 TMEM243Q9BU79 118 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 EMC6Q9BV81 110 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 HES7Q9BYE0 225 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 DAZ3Q9NR90 486 aaKnown RBP1.82□□□□□ -2.12
SKA3-207ENST00000536239 Q9UF83 564 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 SLC25A15Q9Y619 301 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 MYO7BQ6PIF6 2116 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 TET1Q8NFU7 2136 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 SHANK1Q9Y566 2161 aa1.82□□□□□ -2.12
SKA3-207ENST00000536239 GON4LQ3T8J9 2241 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 TRAV41A0A0B4J266 112 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 TRAV40A0A0B4J280 105 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 TRBV6-1A0A0K0K1D8 114 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 PRSS46E5RG02 174 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 K7EMI3 77 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 NDUFB3O43676 98 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 SS18L1O75177 396 aaPredicted RBP1.81□□□□□ -2.12
SKA3-207ENST00000536239 IGHV3-30P01768 117 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 IGHV3-33P01772 117 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 IGF1P05019 195 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 INAFM2P0DMQ5 153 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 IGHV3-30-5P0DP03 117 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 DEFA4P12838 97 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 CD24P25063 80 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 ZNF137PP52743 207 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 FGF12P61328 243 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 FKBP1BP68106 108 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 Q6JHZ5 121 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 SCGB1D4Q6XE38 83 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 FP248Q71RG6 208 aaPredicted RBP1.81□□□□□ -2.12
SKA3-207ENST00000536239 MIR17HGQ75NE6 70 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 LINC00596Q86U02 117 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 MKXQ8IYA7 352 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 DAND5Q8N907 189 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 DCAF4L2Q8NA75 395 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 Q8NBF4 154 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 NFAM1Q8NET5 270 aaPredicted RBP1.81□□□□□ -2.12
SKA3-207ENST00000536239 NUP37Q8NFH4 326 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 VSIG2Q96IQ7 327 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 TTTY13Q9BZ97 58 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 CYSTM1Q9H1C7 97 aa1.81□□□□□ -2.12
SKA3-207ENST00000536239 TNRC6BQ9UPQ9 1833 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 TRGV8A0A0C4DH27 118 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1-6A0A0C4DH72 117 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 A0A0J9YY99 117 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms