RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
LIG1-203ENST00000536218 SLC25A20O43772 301 aa10.76□□□□□ -0.69
LIG1-203ENST00000536218 ORM1P02763 201 aa10.76□□□□□ -0.69
LIG1-203ENST00000536218 HOXB4P17483 251 aaPredicted RBP10.76□□□□□ -0.69
LIG1-203ENST00000536218 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
LIG1-203ENST00000536218 UTP20O75691 2785 aaKnown RBP10.75□□□□□ -0.69
LIG1-203ENST00000536218 ODF3BA8MYP8 253 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 IGHV3-23P01764 117 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 EGR2P11161 476 aaPredicted RBP10.75□□□□□ -0.69
LIG1-203ENST00000536218 UBE2D3P61077 147 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 UBE2D2P62837 147 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 PLNP26678 52 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 RNF185Q96GF1 192 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 RNF5Q99942 180 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 TRBV19A0A075B6N1 114 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 Q8TAT8 98 aa10.75□□□□□ -0.69
LIG1-203ENST00000536218 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
LIG1-203ENST00000536218 I3L2K1 104 aa10.74□□□□□ -0.69
LIG1-203ENST00000536218 CRIP2P52943 208 aaPredicted RBP10.74□□□□□ -0.69
LIG1-203ENST00000536218 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
LIG1-203ENST00000536218 CHCHD5Q9BSY4 110 aa10.74□□□□□ -0.69
LIG1-203ENST00000536218 IGKV2-40A0A087WW87 121 aaPredicted RBP10.74□□□□□ -0.69
LIG1-203ENST00000536218 IGKV2D-40P01614 121 aaPredicted RBP10.74□□□□□ -0.69
LIG1-203ENST00000536218 NDPQ00604 133 aa10.74□□□□□ -0.69
LIG1-203ENST00000536218 KLHL30-AS1Q8NEE0 82 aa10.74□□□□□ -0.69
LIG1-203ENST00000536218 PRADC1Q9BSG0 188 aa10.74□□□□□ -0.69
LIG1-203ENST00000536218 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
LIG1-203ENST00000536218 ASIPP42127 132 aa10.73□□□□□ -0.69
LIG1-203ENST00000536218 SLC25A16P16260 332 aa10.73□□□□□ -0.69
LIG1-203ENST00000536218 SIGLEC15Q6ZMC9 328 aa10.73□□□□□ -0.69
LIG1-203ENST00000536218 K7EIM0 57 aa10.73□□□□□ -0.69
LIG1-203ENST00000536218 IGHV4-39P01824 125 aa10.73□□□□□ -0.69
LIG1-203ENST00000536218 LMO4P61968 165 aa10.73□□□□□ -0.69
LIG1-203ENST00000536218 DOPEY1Q5JWR5 2465 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 IGKV1-17P01599 117 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 PRB1P04280 392 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 UBE2D1P51668 147 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 LAGE3Q14657 143 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 NDUFA11Q86Y39 141 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 SIRPDQ9H106 197 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 POLQO75417 2590 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 ZNF462Q96JM2 2506 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 IGHV3-35A0A0C4DH35 117 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 H7C1H1 209 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 Q8N8P6 123 aa10.72□□□□□ -0.69
LIG1-203ENST00000536218 F8VRH5 84 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 SAA4P35542 130 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 PVRIGQ6DKI7 326 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 NPBQ8NG41 125 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 OR10J6PQ8NGY7 276 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 ZFHX3Q15911 3703 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 IGHV3OR16-8A0A075B7F1 116 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 Q8N1Y9 231 aa10.71□□□□□ -0.69
LIG1-203ENST00000536218 CSPG4Q6UVK1 2322 aa10.71□□□□□ -0.7
LIG1-203ENST00000536218 TRBV6-1A0A0K0K1D8 114 aa10.71□□□□□ -0.7
LIG1-203ENST00000536218 MRPL23Q16540 153 aaKnown RBP10.71□□□□□ -0.7
LIG1-203ENST00000536218 RASL10AQ92737 203 aa10.71□□□□□ -0.7
LIG1-203ENST00000536218 LRRK2Q5S007 2527 aa10.7□□□□□ -0.7
LIG1-203ENST00000536218 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
LIG1-203ENST00000536218 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
LIG1-203ENST00000536218 CSDC2Q9Y534 153 aaKnown RBP10.7□□□□□ -0.7
LIG1-203ENST00000536218 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
LIG1-203ENST00000536218 LOC107984640A0A0U1RRK4 108 aa10.7□□□□□ -0.7
LIG1-203ENST00000536218 TEX49A0A1B0GTD5 131 aa10.7□□□□□ -0.7
LIG1-203ENST00000536218 RPL7P18124 248 aaKnown RBP10.7□□□□□ -0.7
LIG1-203ENST00000536218 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
LIG1-203ENST00000536218 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 ECSCRQ19T08 205 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 NRGNQ92686 78 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 BEX4Q9NWD9 120 aaPredicted RBP10.69□□□□□ -0.7
LIG1-203ENST00000536218 CD7P09564 240 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 SCGB3A1Q96QR1 104 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 EPG5Q9HCE0 2579 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 USP24Q9UPU5 2620 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 EMP1P54849 157 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 MINOS1Q5TGZ0 78 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 CCL19Q99731 98 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 MINOS1-NBL1R4GNA1 71 aa10.69□□□□□ -0.7
LIG1-203ENST00000536218 PF4V1P10720 104 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 UBE2E1P51965 193 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 BRD3OSQ6XYD6 125 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 PRR25Q96S07 402 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 C21orf62Q9NYP8 219 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 LINC01619G3V211 115 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 TMEM219Q86XT9 240 aa10.68□□□□□ -0.7
LIG1-203ENST00000536218 CSMD2Q7Z408 3487 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 IGHV4-61A0A0C4DH41 118 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 CFC1P0CG37 223 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 ZNF56Q15929 161 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 Q1RN00 199 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 CELSR2Q9HCU4 2923 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 IGHV7-81A0A0B4J1V7 117 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms