RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 RPL23P62829 140 aaKnown RBP11.41□□□□□ -0.58
ATL3-202ENST00000535789 RNF212Q495C1 297 aa11.41□□□□□ -0.58
ATL3-202ENST00000535789 MUC21Q5SSG8 566 aa11.41□□□□□ -0.58
ATL3-202ENST00000535789 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
ATL3-202ENST00000535789 LINC01551Q86U37 167 aa11.41□□□□□ -0.58
ATL3-202ENST00000535789 OCC1Q8TAD7 63 aa11.41□□□□□ -0.58
ATL3-202ENST00000535789 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
ATL3-202ENST00000535789 TRAV26-1A0A087WT03 109 aa11.4□□□□□ -0.58
ATL3-202ENST00000535789 NUDT3O95989 172 aa11.4□□□□□ -0.58
ATL3-202ENST00000535789 SAPCD1Q5SSQ6 148 aa11.4□□□□□ -0.58
ATL3-202ENST00000535789 C18orf15Q96N68 181 aa11.4□□□□□ -0.58
ATL3-202ENST00000535789 NDFIP1Q9BT67 221 aa11.4□□□□□ -0.58
ATL3-202ENST00000535789 HERC2O95714 4834 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 TRGV1A0A0A0MS02 117 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 A0A0J9YY99 117 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 KIAA1109Q2LD37 5005 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 LGALS9BQ3B8N2 356 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 VSIG2Q96IQ7 327 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 MRPL16Q9NX20 251 aaKnown RBP11.39□□□□□ -0.59
ATL3-202ENST00000535789 MDFICQ9P1T7 246 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 LINC00588Q9Y4M8 146 aa11.39□□□□□ -0.59
ATL3-202ENST00000535789 A0A1B0GVY2 172 aa11.38□□□□□ -0.59
ATL3-202ENST00000535789 GCGP01275 180 aa11.38□□□□□ -0.59
ATL3-202ENST00000535789 ZNF80P51504 273 aaPredicted RBP11.38□□□□□ -0.59
ATL3-202ENST00000535789 PNRC1Q12796 327 aaPredicted RBP11.38□□□□□ -0.59
ATL3-202ENST00000535789 OR5I1Q13606 314 aa11.38□□□□□ -0.59
ATL3-202ENST00000535789 ADIRFQ15847 76 aa11.38□□□□□ -0.59
ATL3-202ENST00000535789 ZNRF2Q8NHG8 242 aa11.38□□□□□ -0.59
ATL3-202ENST00000535789 ISOC2Q96AB3 205 aa11.38□□□□□ -0.59
ATL3-202ENST00000535789 APOC3P02656 99 aa11.37□□□□□ -0.59
ATL3-202ENST00000535789 MGST1P10620 155 aaKnown RBP11.37□□□□□ -0.59
ATL3-202ENST00000535789 CRIP1P50238 77 aa11.37□□□□□ -0.59
ATL3-202ENST00000535789 SMUG1Q53HV7 270 aa11.37□□□□□ -0.59
ATL3-202ENST00000535789 TRGV2A0A075B6R0 118 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 C19orf71A6NCJ1 209 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 ZNF415Q09FC8 603 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 TDRG1Q3Y452 100 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 PRR27Q6MZM9 219 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 SVBPQ8N300 66 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 CLRN3Q8NCR9 226 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 C11orf21Q9P2W6 132 aa11.35□□□□□ -0.59
ATL3-202ENST00000535789 SH2D1AO60880 128 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 IGHV3-53P01767 116 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 TYMSP04818 313 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 S100A1P23297 94 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 FAM162BQ5T6X4 162 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 FAM231DQ6ZW35 169 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 KRTAP1-5Q9BYS1 174 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 RNASE7Q9H1E1 156 aaKnown RBP11.34□□□□□ -0.59
ATL3-202ENST00000535789 BIN3Q9NQY0 253 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 NAGKQ9UJ70 344 aa11.34□□□□□ -0.59
ATL3-202ENST00000535789 A0A096LPF7 62 aa11.33□□□□□ -0.6
ATL3-202ENST00000535789 H3BNG1 76 aa11.33□□□□□ -0.6
ATL3-202ENST00000535789 M0R036 132 aa11.33□□□□□ -0.6
ATL3-202ENST00000535789 GNRH2O43555 120 aa11.33□□□□□ -0.6
ATL3-202ENST00000535789 PFN1P07737 140 aaKnown RBP11.33□□□□□ -0.6
ATL3-202ENST00000535789 FAM3BP58499 235 aaPredicted RBP11.33□□□□□ -0.6
ATL3-202ENST00000535789 ESRGQ1W209 222 aa11.33□□□□□ -0.6
ATL3-202ENST00000535789 SFRP2Q96HF1 295 aa11.33□□□□□ -0.6
ATL3-202ENST00000535789 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
ATL3-202ENST00000535789 SNAPINO95295 136 aa11.32□□□□□ -0.6
ATL3-202ENST00000535789 NUDT10Q8NFP7 164 aa11.32□□□□□ -0.6
ATL3-202ENST00000535789 NUDT11Q96G61 164 aa11.32□□□□□ -0.6
ATL3-202ENST00000535789 OSTCQ9NRP0 149 aa11.32□□□□□ -0.6
ATL3-202ENST00000535789 TRGV11A0A075B6L2 103 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 TRAV21A0A0B4J279 112 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 NBDYA0A0U1RRE5 68 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 B4DEV8 164 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 FHL2Q14192 279 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 RHEBQ15382 184 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 ATRAIDQ6UW56 229 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 FAM159AQ6UWV7 190 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 LINC00336Q6ZUF6 198 aa11.31□□□□□ -0.6
ATL3-202ENST00000535789 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 CCL18P55774 89 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 OR10G8Q8NGN5 311 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 RASL10AQ92737 203 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 V9GYV3 84 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
ATL3-202ENST00000535789 P01737 135 aa11.29□□□□□ -0.6
ATL3-202ENST00000535789 CRYBA4P53673 196 aa11.29□□□□□ -0.6
ATL3-202ENST00000535789 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
ATL3-202ENST00000535789 ZNF575Q86XF7 245 aa11.29□□□□□ -0.6
ATL3-202ENST00000535789 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
ATL3-202ENST00000535789 UPK3BQ9BT76 320 aa11.29□□□□□ -0.6
ATL3-202ENST00000535789 A0A087WWC5 75 aa11.28□□□□□ -0.6
ATL3-202ENST00000535789 IGKV3D-20A0A0C4DH25 116 aa11.28□□□□□ -0.6
ATL3-202ENST00000535789 GATCO43716 136 aaKnown RBP11.28□□□□□ -0.6
ATL3-202ENST00000535789 MT-ND4LP03901 98 aa11.28□□□□□ -0.6
ATL3-202ENST00000535789 RPL19P84098 196 aaKnown RBP11.28□□□□□ -0.6
ATL3-202ENST00000535789 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
ATL3-202ENST00000535789 ANAPC16Q96DE5 110 aa11.28□□□□□ -0.6
ATL3-202ENST00000535789 SPXQ9BT56 116 aa11.28□□□□□ -0.6
ATL3-202ENST00000535789 RPP21Q9H633 154 aaKnown RBP11.28□□□□□ -0.6
ATL3-202ENST00000535789 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
ATL3-202ENST00000535789 LRP1BQ9NZR2 4599 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms